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Method Article

Single-Cell Culture of Bacteria Within Giant Vesicles

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September 26th, 2025

In This Article

Abstract

Source: Morita, M., et al. Bacterial Cell Culture at the Single-cell Level Inside Giant Vesicles. J. Vis. Exp. (2019).

This video demonstrates a method for culturing and observing individual bacterial cells encapsulated inside giant vesicles anchored to a supported lipid bilayer. The system enables stable, long-term imaging of single-cell growth dynamics in a confined, physiologically relevant microenvironment.

Protocol

1. Preparation of a giant vesicle (GV) Observation System (Bacterial Cell Culture System)

  1. Preparation of small vesicles (SVs) for constructing a supported bilayer membrane
    1. Pour 20 μL of the POPC (1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine) solution and 4 μL of the biotin-PEG-DSPE (1,2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[biotinyl(polyethyleneglycol)-2000) solution into a glass tube.
    2. Evaporate the organic solvent by air flow to form a lipid film and place this sample in a desiccator for 1 h to completely evaporate the organic solvent.
    3. Add 200 μL of 200 mM gluc....

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Results

Giant vesicle setup on heat stage; microscopy equipment, lipid interactions, biological research diagram.

Figure 1: The observation system of bacterial cell culture inside GVs. (a

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
BactotryptoneBD Biosciences211705
ChloroformWako Pure Chemicals032-21921
Cover glass (18 × 18 mm)Matsunami Glass Ind.C018181thickness 0.13–0.17 mm
Cover glass (30 × 40 mm)Matsunami Glass Ind.custom-orderthickness 0.25–0.35 mm
Desktop centrifugeHi-Tech Co.ATT101swing rotor type
Double-faced seal (10 × 10 × 1 mm)NitomsT4613
GlucoseWako Pure Chemicals049-31165
Inverted microscopeOlympusIX-73
MethanolWako Pure Chemicals133-16771
Microscopic heating stage systemTOKAI HITTP-110R-100
Mineral oilNacalai Tesque23334-85
NeutravidinThermo Fisher Scientific31000
Objective lensOlympusLUCPLFLN 40×/0.6 NA
Polycarbonate membranesAvanti Polar Lipids610005
sCMOS cameraAndorZyla 4.2 pluspore size 100 nm
Sodium chlorideWako Pure Chemicals191-01665
SucroseWako Pure Chemicals196-00015
Ultrasonic bathAS ONEASU-3D
Yeast extractBD Biosciences212750
0.6 mL lidded plastic tubeWatson130-806C
1.5 mL lidded plastic tubeSumitomo Bakelite Co.MS4265-M
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocolineAvanti Polar Lipids850457P
1,2-distearoyl-snglycero-3-phosphoethanolamine-N-[biotinyl(polyethyleneglycol)-2000]Avanti Polar Lipids880129PPOPC
Biotin-PEG-DSPE

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