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Method Article

Headspace Gas Chromatography: A Technique to Assess Ethanol Concentration in Zebrafish Embryos

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July 8th, 2025

In This Article

Abstract

Source: Lovely, C. B. et al. Quantification of Ethanol Levels in Zebrafish Embryos Using Head Space Gas Chromatography. J. Vis. Exp. (2020).

This video demonstrates the use of headspace gas chromatography to determine the ethanol concentrations in zebrafish embryos. This method provides a useful tool for qualitative and quantitative analysis of volatile organic compounds.

Protocol

All procedures involving animal models have been reviewed by the local institutional animal care committee and the JoVE veterinary review board.

1. Measuring the embryonic volume using water displacement

NOTE: In this protocol, 24 h postfertilization (hpf) embryos (Figure 1) are used. The embryos used in the volume measurements are not used in the ethanol analysis.

  1. Place 10 embryos and extraembryonic fluid in 1.5 mL microcentrifuge tube marked at a volume of 250 μL (Figure 2A). Add water to the 250 μL fill line (see sample with dyed water in....

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Results

Zebrafish embryo 24 hrs post-fertilization, labeled diagram; yolk, extraembryonic fluid, chorion.
Figure 1: An image of an embryo at 24 h postfertilization (hpf) inside the chorion. The embryo and the yolk are surrounded by the extraembryonic fluid, all located inside the chorion.

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
AutoSampler, CP-8400VarianGas Chromatograph Autosampler
EthanolDecon Labs2701
Gas chromatograph vial with polytetrafluoroethylene/silicone septum and plastic cap 2 mLAgilent8010-0198Can reuse the vials after cleaning, but not the caps/septa
Gas Chromatograph, CP-3800Varian
HeliumProvided by contract to the university
HP Innowax capillary columnAgilent19095N-123I30 m x 0.53 mm x 1.0 μm film thick
HyrdogenProvided by contract to the university
Microcentrifuge tube 1.5 mLFisher Scientific2682002
Micropipette tips 10 μLFisher Scientific13611106
Micropipette tips 1000 μLFisher Scientific13611127
Micropipette tips 200 μLFisher Scientific13611112
Pipetman L p1000L MicropipetteGilsonFA10006M
Pipetman L p200L MicropipetteGilsonFA10005M
Pipetman L p2L MicropipetteGilsonFA10001M
Polytetrafluoroethylene/silicone septum and plastic capAgilent5190-7021Replacement caps/septa for gas chromatograph vials
Solid-phase microextraction fiber assembly Carboxen/PolydimethylsiloxaneMillipore Sigma57343-UReplacement fibers
Star Chromatography WorkstationVarianChromatography software
Thermogreen Low Bleed (LB-2) SeptaMillipore Sigma23154Replacement inlet septa

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