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Method Article

Neuronal Death Assay to Evaluate Cell Death in Ex Vivo Epilepsy Model

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July 8th, 2025

In This Article

Abstract

Source: Carvalho, M., et al., A Model of Epileptogenesis in Rhinal Cortex-Hippocampus Organotypic Slice Cultures. J. Vis. Exp. (2021)

This video demonstrates the technique of assessing neuronal death in rhinal cortex-hippocampus organotypic slices. Neuronal death occurs via evolving epileptic seizures — resembling in vivo epilepsy — and is detected through dual-staining of the dead cells using propidium iodide and immunofluorescence.

Protocol

All procedures involving animal models have been reviewed by the local institutional animal care committee and the JoVE veterinary review board.

1. Preparation of rhinal cortex-hippocampus slices

NOTE: The preparation of rhinal cortex-hippocampus slices uses P6-7 Sprague-Dawley rats.

  1. Culture setup and medium preparation
    1. On the day before the culture, prepare the required media and place them at 4 °C.
    2. Prepare dissection medium: 25 mM glucose in Gey's Balanced Salt Solution (GBSS).
    3. Prepare culture medium: 50% Opti-MEM, 25% HBSS, 25% Horse Serum (HS....

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Results

Dissection and section preparation of tissue in petri dishes for in vitro experimental analysis.
Figure 1: Detailed procedure for the preparation of rhinal cortex-hippocampus organotypic slices. (A) Remove the brain from the head and place it in ice-cold GBSS with the dorsal surface faced up. (B) Insert the forceps into the cerebellum. Open the brain .......

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
50 mL Centrifuge Tube, Conical BottomCorning430829
70% EthanolManuel Vieira, LdaUN1170
Anti-NeuN (rabbit)Werfen16712943SDilute at a ratio 1:500
B-27™ Supplement (50X), serum freeThermo Fisher Scientific17504-044
Blades for scalpel handleFine Science Tools10011-00
Bovine Serum Albumin (BSA)NZYTechMB046025% BSA is used to dilute the primary antibodies. Add 0.5g BSA in 10 mL PBS.
Brain/Tissue Slice Chamber SystemWarner Instruments
Cell culture inserts, 30 mm, hydrophilic PTFEMillipore SASPICM03050
Cold light sourceSCHOTTKL 300 LED
Confocal laser microscopeZeissLSM 710
Conventional incubatorThermo Scientific HeraeusBB15, Function LineSet to 37 °C and 5% CO2
D(+)-Glucose monohydrateMerck Millipore1.08342.1000
D-(+)-Glucose solution, 45% in waterSigmaG8769
di-Sodium hydrogen phosphate dihydrateMerck Milipore1.06580.1000
Dissecting microscope/magnifierMEIJI TECHNO CO. LTD122285
Donkey anti-rabbit IgG (H+L) coupled to Alexa Fluor 488InvitrogenA21206Dilute at a ratio 1:500
Dumont #5 Fine Forceps Biologie InoxFine Science Tools11254-20
Dumont #5 Forceps Standard InoxFine Science Tools11251-20
Dumont #7 Forceps Standard DumoxelFine Science Tools11271-30
Dumont Medical #7S Forceps Short Curve InoxFine Science Tools11273-22
Gentamycin stock solution, 50 mg/mLThermo Fisher Scientific15750-037
Gey’s Balanced Salt Solution (GBSS)Biological Industries01-919-1A
Glass ElectrodesScience ProductsGB150F-10Round tips homemade
Glass Pasteur pipettes, 230 mmVWR International612-1702
Hank’s Balanced Salt Solution (HBSS)Thermo Fisher Scientific24020-091
Horse Serum, Heat Inactivated (HS)Thermo Fisher Scientific26050-088
Hydrochloric acidMerck Milipore1.09057.1000
Hydrophobic PenDakoS200230-2
INCU-Line IL10VWR390-0384
Iris Spatula CurvedFine Science Tools10092-12
Labculture Class II Biological Safety CabinetHERASafeHS 12
Lens Cleaning PaperTIFFEN
L-Glutamine solution 200 mM (Q)Thermo Fisher Scientific25030-024
Micro tube 0.5 mL, PPSARSTEDT72,699
Micro tube 1.5 mL, PPSARSTEDT72.690.001
Micro tube 2.0 mL, PPSARSTEDT72.691
Miroscope Cover Glasses, 24 mm x 60 mmMarienfeld102242
Nail polishCliché
Neurobasal-A Medium (NBA)Thermo Fisher Scientific10888-022
Opti-MEM® I Reduced-Serum MediumThermo Fisher Scientific31985-047
Paraformaldehyde, powderVWR Chemicals2,87,94,295
Peristaltic pumpGilsonM312
Phosphate saline buffer (PBS)Homemade. PBS with 0.5% Tween-20 (PBS-T) is used to wash slices during the immunohistochemistry assay.
Phosphate standard solutions, PO43- in waterBDH ARISTAR452232C
Pipette setGilsonP2, P10, P20, P100, P200, P1000
Platinum 5 bladesGillette
Propidium iodide (PI)Sigma-AldrichP4170-25MG
Qualitative Filter Paper, Cellulose, Grade 1, 55 mmWhatman1001-055Medium retention 11µm
Qualitative Filter Paper, Cellulose, Grade 1, 90 mmWhatman1001-090Medium retention 11µm
Scalpel handleFine Science Tools91003-12
Slip Tip Insulin Syringe without Needle 1 mLSOL-M161000
Student Scissors Straight SharpSharp 12cmFine Science Tools91402-12
SuperFrost Plus™ Adhesion slidesThermo Fisher ScientificJ1800AMNZ
TC-Treated Sterile 60 x 15mm Tissue Culture DishCorningCORN430166
TC-Treated Sterile 6-Wells PlatesCorningCORN3516
Tissue ChopperThe Mickle Laboratory Engineering CO. LTD.MTC/2Set to 350 μm
Triton X-100BDH14630
Tween-20SigmaP2287

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