Methods for Studying the Mechanisms of Action of Antipsychotic Drugs in Caenorhabditis elegans

Summary

Approaches for testing the effects of antipsychotic drugs (APDs) in Caenorhabditis elegans are demonstrated. Assays are described for testing drug effects on development and viability and on pharyngeal pumping rate. These methods are also applicable for pharmacogenetic experiments with drug classes other than APDs.

Abstract

Caenorhabditis elegans is a simple genetic organism amenable to large-scale forward and reverse genetic screens and chemical genetic screens. The C. elegans genome includes potential antipsychotic drug (APD) targets conserved in humans, including genes encoding proteins required for neurotransmitter synthesis and for synaptic structure and function. APD exposure produces developmental delay and/or lethality in nematodes in a concentration-dependent manner. These phenotypes are caused, in part, by APD-induced inhibition of pharyngeal pumping^1,2. Thus, the developmental phenotype has a neuromuscular basis, making it useful for pharmacogenetic studies of neuroleptics. Here we demonstrate detailed procedures for testing APD effects on nematode development and pharyngeal pumping. For the developmental assay, synchronized embryos are placed on nematode growth medium (NGM) plates containing APDs, and the stages of developing animals are then scored daily. For the pharyngeal pumping rate assay, staged young adult animals are tested on NGM plates containing APDs. The number of pharyngeal pumps per unit time is recorded, and the pumping rate is calculated. These assays can be used for studying many other types of small molecules or even large molecules.

Introduction

Caenorhabditis elegans is a simple genetic organism amenable to large-scale forward and reverse genetic screens and chemical genetic screens. C. elegans is sensitive to a wide spectrum of bioactive compounds and has therefore been used successfully to define the mechanisms of action of a variety of such compounds. For example, bioactive compounds studied using worm pharmacogenetics include acetylcholine receptor agonists (e.g. levamisole, nicotine, morantel, and pyrantel), anesthetics (e.g. halothane), caffeine, cholinesterase inhibitors (e.g. aldicarb, lannate, and trichlorfon), fluoride, GABA-related compounds (e.g. GABA and muscimol), ivermectin, paraquat, phorbol esters, and serotonin-related drugs (e.g. serotonin and imiprimine)³. Furthermore, C. elegans has been used for large-scale small molecule screens, allowing discovery of new bioactive compounds and identification of novel genetic targets⁴.

The C. elegans genome includes potential antipsychotic drug (APD) targets conserved in humans, including genes encoding proteins required for neurotransmitter synthesis and for synaptic structure and function⁵. Thus, C. elegans neurogenetics and neurobiology offer methods for discovering novel molecular mechanisms of action of APDs. In nematodes, APD exposure early in development produces developmental delay, and at higher concentrations, lethality^2,6. APD exposure during adulthood produces behavioral phenotypes. For example, clozapine exposure inhibits locomotion and pharyngeal pumping and enhances egg laying^1,2,7.

APD-induced developmental delay and lethality are powerful phenotypes for large-scale chemical genetic screens. These phenotypes are complex in so far as they likely have more than one cellular and genetic basis. Therefore, such genetic screens are expected to yield a variety of indirect drug targets. However, our laboratory has conducted candidate gene screens and a genome-wide RNAi screen for suppressors of APD-induced developmental delay and lethality and has successfully recovered genes which likely encode direct targets, including dopamine, insulin, and nicotinic acetylcholine receptors^2,8. Genetic screens based on APD-induced behaviors in the adult have also led to the identification of novel APD targets, and we are now validating targets from both developmental and behavioral screens in mammals⁷. Thus, an invertebrate chemical genetic approach to discover novel molecular mechanisms of action of APDs appears to be feasible^5,8.

The C. elegans pharynx is an organ that includes 20 neurons, 20 muscle cells, and 20 accessory cells, wrapped by a basement membrane. Similar to the mammalian heart, the pharynx is autonomous and constantly pumps food in from the external environment⁹. Inhibition of the pharyngeal pumping rate compromises food uptake, and thus mutations or drugs that inhibit pharyngeal pumping cause developmental delay or arrest⁹. APDs inhibit the pharyngeal pumping rate, accounting in part for their effects on development and viability^1,2. Here, we use the atypical APD clozapine as an example to demonstrate drug assays for nematode development and pharyngeal pumping.

Protocol

1. Developmental Delay/Lethality Assay: The Wild-Type (N2) and Two Mutant (Mut1 and Mut2) Strains Are Tested in Three Clozapine Concentrations in a 12-well Plate

1. On day 1, pour 2 ml NGM medium¹⁰ into each well of a 12-well plate (each well with a 2 cm diameter) and allow to harden on the bench at room temperature (RT) overnight. The same day, pick a colony of Escherichia coli OP50 bacteria, infect a bottle of 50 ml LB solution, and culture it in a 37 °C shaker at 220 rpm rotation overnight.
2. On day 2, transfer 20 µl OP50 bacterial culture onto the center of each NGM well. Incubate the plates in a 37 °C incubator or leave them at RT overnight to allow the bacterial lawn to grow thicker.
3. Make an 80 mM clozapine stock solution by dissolving clozapine in DMSO (dimethyl sulfoxide) solvent. Then make an 80 µl working solution with the stock solution diluted in 1.7 mM acetic acid based on Table 1.
   Note: The working solution for a particular drug of interest must be determined by doing a series of preliminary concentration tests to find the most appropriate concentration for distinguishing the wild type from the mutants.
4. Transfer 80 µl clozapine working solution onto the seeded NGM plate well and swirl the plate to allow the solution to distribute evenly on the surface. Wait for the plate to dry. Use the plate for the assay on the same day or place it in a 20 °C incubator to be used the next day.
   Note: The working solution is a drug suspension due to the low solubility of clozapine, especially at higher concentration. Therefore, vortex the tube before transferring the solution to the drug plate in order to guarantee that the drug concentration is accurate.
5. Wash worms off a 3.5 cm plate containing many gravid adults with M9 buffer and then spin them down in a 15 ml tube at 2,000 rpm for 1 min.
6. Aspirate the supernatant. Add 5 ml bleach solution (NaOH:hypochlorite:ddH₂O at 4:1:5) and disrupt the nematodes by gently inverting the tubes.
7. Observe the animals until half of them are dissolved at around 5 min. Spin down the eggs at 2,000 rpm for 1 min.
8. Aspirate the supernatant and add 14 ml M9 buffer rapidly.
9. Spin down the eggs at 2,000 rpm for 1 min and aspirate the supernatant, leaving approximately 100 µl solution. Vortex to suspend the eggs.
10. Transfer 2 µl eggs suspended in M9 onto a regular NGM plate to test how many eggs are transferred. Adjust the volume of the suspended eggs to ensure that there are approximately 30-35 eggs in each transfer. Transfer 30-35 eggs to each well of the assay plate, and then incubate in a 20 °C incubator for 24 hr.
11. On the first day of the assay, score the number of eggs hatched. Adjust the total number of hatched animals to 25/well by picking off the extra worms if necessary.
12. On the following days, observe the animals and score them every 24 hr. Developmental stage is scored based on the size of the animal and the shape of the vulva¹¹. The experiment lasts 5-6 days with the most robust effect typically seen on the third or fourth day.
13. Input the data into an Excel file and calculate the percentage of animals at each developmental stage for every day of the experiment. Generate graphs with the function '100% Stacked Column' in the '2-D column' menu.

2. Pharyngeal Pumping Assay: Young Adult Animals for the Wild-type and Mutant Strains Are Scored on Clozapine Assay Plates

1. The assay plate is made following the same protocol used for the developmental delay/lethality assay.
2. Pick 50 L4 animals for each strain to seeded NGM plates 24 hr before the assay and incubate the worms at 20 °C.
3. Pick 10 animals to an assay plate well. Then pick 10 animals to the next well every 15-20 min.
4. After the animals in the first well have been exposed to drug for 30 min, start the assay by observing pharyngeal pumping under a dissection microscope and score the pumps for 20 sec⁹. Once pharyngeal pumping is scored, pick the worm off the plate.

Results

1. Developmental delay/lethality assay result

A typical result for the developmental delay/lethality assay is demonstrated in Figures 1a and 1b. When wild-type animals in the control group have grown to the gravid adult stage (Figure 1a), wild-type animals exposed to clozapine are still in the young larval stages or are dead (Figure 1b). Figure 1c shows a representative result comparing a suppressor mutant (M...

Discussion

Here, we describe methods for testing the effects of APDs on the development and behavior of C. elegans. DMSO or ethanol is used to dissolve clozapine, since the drug is relatively insoluble in water. Because solvents have been reported to affect C. elegans biology¹², DMSO-alone or ethanol-alone control groups are essential. The highest concentration of DMSO used in our assays is up to 3%, which does not have an obvious effect on C. elegans development. DMSO can be used for many smal...

Materials

List of materials used in this article

Name	Company	Catalog Number	Comments
Clozapine	Sigma	C6305
Dimethyl sulfoxide (DMSO)	Sigma	D8418
Acetic acid (HAC)	Fisher	BP2401
Sodium hydroxide (NaOH)	EMD	SX0590-13
Hypochlorite	Sigma-Aldrich	425044
Centrifuge 5810	Eppendorf	5810 000.017
Incubator shaker	New Brunswick Scientific	M1246-0006
Low temperature incubator 815	Precision Scientific	J1790-1B
Stereomicroscope	Olympus	SZX12
Petri dish 35 x 10 mm	Fisher Scientific	NC9434271
12-well Tissue culture plate	BD Falcon	REF 353043