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The retinotectal circuit is the major component of the amphibian visual system. It is comprised of the RGCs in the eye, which project their axons to the optic tectum where they form synaptic connections with postsynaptic tectal neurons. The Xenopus tadpole retinotectal circuit is a popular developmental model to study neural circuit formation and function. There are many attributes of this tadpole's retinotectal circuit that render it a powerful experimental model1,2,3. One major attribute, and the focus of this article, is the ability to carry out whole cell patch clamp recordings from tectal neurons, in vivo or using a whole brain preparation. With an electrophysiology rig outfitted with an amplifier that supports voltage- and current-clamp recording modes, whole cell patch clamp recordings allow a neuron's electrophysiology to be characterized at high resolution. As a result, whole cell patch clamp recordings from tectal neurons across the key stages of retinotectal circuit formation have provided a detailed and comprehensive understanding of the development and plasticity of intrinsic4,5,6,7 and synaptic8,9,10,11 properties. Combining whole cell patch clamp tectal neuron recordings, the ability to express genes or morpholinos of interest in these neurons12, and a method to assess visual guided behavior via an established visual avoidance test13 promotes the identification of links between molecules, circuit function, and behavior.
It is important to note that the type of high resolution data acquired from whole cell patch clamp recordings is not possible using newer imaging approaches such as the genetic calcium indicator GCaMP6, because although using calcium indicators permits the imaging of calcium dynamics across large populations of neurons simultaneously, there is no direct or obvious way that the specific electrical parameters can be obtained by measuring delta fluorescence in the somata, and there is no way to voltage clamp the neuron to measure current-voltage relationships. Clearly these two distinct approaches, electrophysiological recordings and calcium imaging, possess non-overlapping strengths and generate different types of data. Thus, the best approach depends on the specific experimental question being addressed.
Here, we describe our method for acquiring whole cell patch clamp recordings from neurons of the tadpole optic tectum using an in vivo preparation, whole brain preparation, and a newer modified whole brain preparation that was developed in our lab14. In the Representative Results section, we demonstrate the experimental advantages of each preparation and the different types of data that can be obtained. The limits and strengths of the different preparations, as well as tips for troubleshooting, are included in the Discussion section.