Skeletal muscle is the most abundant tissue in the human body, accounting for approximately 40–50% of total body mass1. Skeletal muscle serves as a reservoir of energy in the form of glycogen. During cold exposure, it provides heat through thermogenesis and importantly provides locomotion. Skeletal muscle is composed of multinucleated, post-mitotic myofibers. To sustain muscle maturation and repair, new myonuclei are generated by our skeletal muscle's resident stem cell, the satellite cell (SC). SCs are found on the periphery of postnatal skeletal muscle fibers2,3,4. SCs are identified by the transcription factor Pax7, which is expressed in both quiescent and activated states3,5. Upon injury or hypertrophic stimulation, SCs activate and upregulate MyoD, enter the myogenic program, proliferate, and ultimately fuse with existing or newly forming myofibers to restore muscle function6,7,8. SCs are heterogeneous in their stemness ability, embryological origin (somitic vs non-somitic), stage of postnatal growth (young vs old), and muscle composition (fast vs slow fibers)9,10,11.
Depending on the region of the body, skeletal muscle is tailored to meet the energetic and functional demands of that region. This heterogeneity in muscle fibers is possible due to their contractility and oxidative capacity. Indeed, muscle fibers are composed of slow-twitch oxidative fibers (termed type I and IIa) and fast contracting glycolytic fibers (termed IIx, in rodents IIb)12,13. This beautiful, functional mosaic of fiber types enables us to move freely in our everyday lives. For example, postural muscles such as the soleus (SOL) and erector spinae are in a state of chronic, low-level activation, and thus contain a high proportion of slow-oxidative type-I and type-IIa muscle fibers. In contrast, short but fast-acting muscles such as the extensor digitorum longus (EDL) are mainly composed of glycolytic type-IIx and type-IIb fibers. The fiber composition, however, is not fixed; rather, muscle fibers are dynamic structures capable of shifting from fast-to-slow and vice versa depending on the functional requirements placed upon them. The difference in fiber type contractility is possible due to the content of myosin protein. This is the main protein within skeletal muscle, composed of isoforms of myosin light and heavy chains12,14.
Inside a sarcomere (muscle’s smallest functional unit that generates force), myosin heads and actin interact to form a structure known as a crossbridge. Through hydrolysis of ATP, energy is released by the cycling of the myosin and actin interactions15,16. The Myosin heavy chain (MyHC) is the most appropriate marker for fiber type identification12,13. Depending on the isoform of MyHC expressed, the rate of muscle contractility will vary. As mentioned, type-I fibers are slow oxidative fibers, unlike type-II fibers. Type-I dominant muscle groups contain a higher abundance of oxidative enzymes, are richer in mitochondria, and have a dense capillary network to perfuse the muscle17,18 (think marathon runner). Type-I fibers are encoded by the MYH7 gene13,19. Type-II fibers are fast to fatigue, contain a high proportion of glycolytic enzymes, and have a greater maximum velocity of shortening, making them ideal for short bursts of power or movement (think power lifter). Type-II fibers for type-IIa, IIx, and IIb (in rodents) are encoded by the MYH2, MYH1, and MYH4 genes, respectively20,21. Unsurprisingly, any pathophysiological insult that affects muscle integrity will alter fiber type composition and lead to detrimental effects on muscle function, potentially lowering quality of life. In fact, many muscular dystrophies either start in the satellite cell (satellite cell-opathies) or in the muscle fiber (motor neuron- or muscle tissue-derived), and can cause a shift in fiber type composition22,23,24,25. For example, Spinal cord injury, bedrest studies, and spaceflight (microgravity) show that long-term inactivity can trigger postural muscles to shift from a slow to a fast fiber phenotype26,27,28,29,30. Conversely, in Duchenne muscular dystrophy, both in human and mouse models (mdx), fast glycolytic fibers are affected to a greater extent and with greater severity than their slower counterparts31,32,33,34. Similarly, in facioscapulohumeral muscular dystrophy (FSHD), a fast-to-slow twitch transition is observed with a greater proportion of type-I fibers along with lower force production in type-II fibers24,35,36.
It remains unclear why certain muscle fiber types are selectively affected or spared in different diseases. The fact that these patterns are non-random underscores the importance of dissecting the underlying mechanisms, for which single-fiber isolation has emerged as a powerful and widely used technique. Indeed, since first introduced in the mid-80s by Bischoff37, this indispensable tool has been continually refined and adapted, enabling increasingly precise investigation of muscle biology38,39,40. Importantly, single-fiber isolation maintains SCs as close as possible to their physiological niche, enabling adequate scrutiny of their molecular activity. Although muscle groups such as those from the flexor digitorum brevis (FDB) and EDL can be extracted with relative ease41,42,43, the SOL muscle remains one of the most difficult muscles to obtain a rich population of intact fibers from. This is due to its rigidity, long fiber length, and susceptibility to damage. To address this, a technique has been optimised in the present study that robustly yields a high-quality, viable population of fibers from the notoriously difficult-to-isolate SOL muscle. When combined with EDL fiber isolation, this approach enables culture of fibers and derivative cells (satellite cells, myoblasts, and myotubes) from distinct muscle groups. Critically, this platform allows systematic investigation of the molecular factors that may differentially contribute to diverse muscle pathologies and provides a powerful means to test pharmaceutical interventions in a way that can reveal muscle-type-specific responses and ultimately support the development of effective treatments for skeletal muscle diseases.