Extracellular Nanodomain

An extracellular nanodomain is a nanoscale region outside a cell where molecular components, signals, or material features become spatially organized, influencing how cells sense and respond to their surroundings. In bioengineering, these domains can be created or characterized by controlling the nanoscale presentation of ligands, adhesion sites, extracellular matrix components, or biochemical gradients, thereby regulating receptor clustering and signal transmission at the cell interface. Studying extracellular nanodomains helps clarify how physical and chemical organization shapes cell adhesion, migration, differentiation, and communication. This knowledge supports the design of biomaterials, tissue-engineering scaffolds, drug-delivery systems, and other platforms that more precisely control cell behavior.

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JoVE EoE - Urinary Tract Cancer

Extracellular DNA Staining: A Method to Identify Extracellular DNA in FFPE Tissue Sections

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2023

This video describes the technique of staining extracellular DNA in FFPE tissue sections. The stained extracellular DNA can be quantitated to determine the efficacy of any therapeutic treatment that leads to the death of cancer cells.

Extracellular Vesicle Extraction: A Technique to Isolate Extracellular Vesicles from Whole Tissue Specimens Using Differential Centrifugation

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2023

This video describes the technique of extracting extracellular vesicles from fresh or frozen tissues. The isolated extracellular vesicles can be used for further analysis to uncover their significant roles in disease pathogenesis.

Research

JoVE Journal - Medicine
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Strategic Endothelial Cell Tube Formation Assay: Comparing Extracellular Matrix and Growth Factor Reduced Extracellular Matrix

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Cited by 19 •

2016

This manuscript describes a tube formation assay to quantify the effects of a given compound or condition on angiogenesis by using endothelial cell tube formation in a controlled environment.

Ratiometric Imaging of Extracellular pH in Dental Biofilms

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Cited by 24 •

2016

A pH-sensitive ratiometric dye is used in combination with confocal laser scanning microscopy and digital image analysis to monitor extracellular pH in dental biofilms in real-time.

Neutrophil Extracellular Traps: How to Generate and Visualize Them

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Cited by 296 •

2010

Neutrophil Extracellular Traps (NETs) are an important innate immune mechanism to fight pathogenic bacteria, fungi and parasites. Here we describe methods to isolate neutrophil granulocytes from human blood and to activate them to form NETs. We present preparation techniques to visualize NETs in light and electron microscopy.

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