Intestinal Organoid Culture

Intestinal organoid culture is a biological technique that grows three-dimensional, tissue-like structures from intestinal stem cells to model gut organization and function in vitro. Embedded in an extracellular matrix and supplied with defined growth factors, stem cells proliferate and self-organize into organoids containing crypt-like regions, differentiated epithelial cell types, and a lumen. These cultures provide a controllable system for studying intestinal development, epithelial renewal, barrier function, host-microbe interactions, and disease mechanisms. They also support drug screening and personalized research, offering a more physiologically relevant model than many conventional two-dimensional cell cultures while reducing reliance on animal experiments.

Intestinal Organoid Culture - Related Videos

Research

JoVE Journal - Biology

A Protocol for Lentiviral Transduction and Downstream Analysis of Intestinal Organoids

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Cited by 81 •

2015

In this video protocol we give a step by step explanation of lentiviral transduction in organoids of primary intestinal epithelium and of processing and downstream analysis of these cultures by quantitative RT-PCR, RNA-microarray and immunohistochemistry.

The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids

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Cited by 4 •

2016

Here, a protocol to harvest, maintain, and treat mouse small intestinal organoids with pathogen associated molecular patterns (PAMPs) and Listeria monocytogenes is described, as well as emphasis on gene expression and proper normalization techniques for protein.

Gene Delivery to Mouse Intestinal Organoids Using Lentiviral Vectors

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2026

Source: Van Lidth de Jeude, J. F., et al. Protocol for Lentiviral Transduction and Downstream Analysis of Intestinal Organoids. J. Vis. Exp. (2015)This video describes the lentiviral transduction of mouse intestinal organoids from a crypt-like structure containing suspension. Using a basement membrane matrix as a scaffold and growth factor–supplemented media, lentiviral vectors are introduced to enable stable gene...

A Technique to Develop a Parasite Infection in Intestinal Organoids via Microinjection

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2025

This video demonstrates a microinjection technique to develop a human intestinal organoid infection model. The infectious sporozoite stage of the parasite Cryptosporidium parvum is microinjected into the organoid lumen. Upon invading the epithelial cells of the organoid, it undergoes asexual and sexual reproduction to complete its life cycle and spreads the infection.

Education

JoVE Science Education - Basic Biology

Three-Dimensional Culture Systems: Spheroids and Organoids

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2026

Three-dimensional (3D) culture systems, including spheroids and organoids, support New Approach Methodology (NAM)-aligned research by providing more physiologically relevant models than conventional two-dimensional cell cultures. Because they more closely resemble the structure and cellular interactions of tissues and organs, these systems can provide physiologically relevant data before advancing to animal studies. Spheroids as Disease and Drug Screening Models Spheroids are generated when one...

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