Affinity Matrix

An affinity matrix is a solid support carrying immobilized ligands that selectively capture a biological molecule through specific molecular recognition. In affinity chromatography, a sample passes through the matrix, allowing the target to bind its complementary ligand while unbound components wash away; changing conditions such as pH, ionic strength, or adding a competing molecule then disrupts the interaction and releases the target. Affinity matrices are used to purify proteins, antibodies, nucleic acids, and other biomolecules from complex mixtures. Their selectivity can improve sample purity and simplify downstream analysis, diagnostics, structural studies, and biomanufacturing.

Affinity Matrix - Related Videos

Education

JoVE Core - Chemistry

Electron Affinity

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2020

The electron affinity (EA) is the energy change for adding an electron to a gaseous atom to form an anion (negative ion). This process can be either endothermic or exothermic, depending on the element. Many of these elements have negative values of EA, which means that energy is released when the gaseous atom accepts an electron. However, for some elements, energy is required for the atom to become negatively charged, and the value of their EA is positive. Just as with ionization energy,...

Affinity and Avidity

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2019

Overview Antibodies bind to toxins or substances on the surface of cells, bacteria, viruses, or fungi. The substance is called an antigen, and the precise binding site is the epitope. The strength of the antibody-epitope interaction is called affinity. When an antibody binds an antigen by multiple epitopes, the cumulative strength of the interaction is called avidity. The strength of the interaction influences the elicited immune response. The Adaptive Immune System Increases Efficiency by...

Research

JoVE Journal - Biochemistry

Bacterial Expression and Purification of Human Matrix Metalloproteinase-3 using Affinity Chromatography

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Cited by 5 •

2022

His-tag purification, dialysis, and activation are employed to increase yields of soluble, active matrix metalloproteinase-3 catalytic domain protein expression in bacteria. Protein fractions are analyzed via SDS-PAGE gels.

Research

JoVE Journal - Biology
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Orthogonal Protein Purification Facilitated by a Small Bispecific Affinity Tag

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Cited by 7 •

2012

A novel and highly efficient two-step affinity chromatography protocol has been developed and is described in detail. The method is based on a small purification tag with two inherent affinities and is applicable to a wide range of target proteins with different properties.

Purification of Viral Integrase Using Heparin Affinity Chromatography

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2026

Source: Lopez Jr., M. et al. Detection and Removal of Nuclease Contamination During Purification of Recombinant Prototype Foamy Virus Integrase. J. Vis. Exp. (2017)This video demonstrates the procedure for purifying viral integrase from bacterial nuclease contamination using heparin Sepharose column chromatography followed by SDS-PAGE analysis to confirm protein purity.

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