Organoid Fragmentation

Organoid fragmentation is the controlled division of three-dimensional, stem cell-derived tissue models into smaller pieces for maintenance, expansion, or experimental manipulation. The process typically uses mechanical disruption, such as pipetting or cutting, to reduce organoid size while preserving viable cells, tissue architecture, and essential cell-cell or cell-matrix interactions; fragments can then be embedded in a suitable extracellular matrix and cultured under defined conditions. In biology, fragmentation supports organoid passaging, increases culture yield, and helps standardize starting material for disease modeling, drug testing, developmental studies, and tissue engineering. Consistent fragmentation is important for reproducible growth and comparable experimental outcomes.

Organoid Fragmentation - Related Videos

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JoVE Journal - Biology
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Electroeluting DNA Fragments

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Cited by 8 •

2010

This procedure allows the purification of DNA fragments with high yield.

Research

JoVE Journal - Immunology and Infection

Organoids as Model for Infectious Diseases: Culture of Human and Murine Stomach Organoids and Microinjection of Helicobacter Pylori

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Cited by 144 •

2015

Stem cell derived cultures harbor tremendous potential to model infectious diseases. Here, the culture of mouse and human gastric organoids derived from adult stem cells is described. The organoids are microinjected with the gastric pathogen Helicobacter pylori.

In vitro Organoid Culture of Primary Mouse Colon Tumors

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Cited by 43 •

2013

A simple method to establish primary murine colon tumor organoid is described. This method utilizes the feature that colon tumor cells survive and grow into organoids in media containing limited growth factors, whereas normal colon epithelial do not.

Organoid Electroporation: A Method to Transfect Plasmid DNA into Gastrointestinal Organoids

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2023

This video describes the electroporation protocol for transfecting large plasmids into three-dimensional gastrointestinal organoids to prove its universal functionality in different entities, namely pancreatic ductal adenocarcinoma (PDAC), colorectal cancer (CRC), cholangiocarcinoma (CCC), and gastric cancer (GC) organoids.

CRC Organoid Culture: A Method to Obtain 3D Organoids from Colorectal Cancer Cells

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2023

This video describes the detailed protocol for generating 3D organoids from murine-model derived colorectal cancer cells by propagating them on artificial extracellular matrix coated plates. These CRC organoids can be used as a model to study the primary growth of human tumor cells and metastasis.

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