Subcellular Resolution Imaging

Subcellular resolution imaging comprises microscopy methods that visualize structures and molecular events within individual cells, making it possible to connect cellular organization with function. In neuroscience, these methods use high-magnification optics, fluorescent labels, optical sectioning, or super-resolution strategies to distinguish features such as synaptic proteins, dendritic spines, axonal compartments, and organelles that are too small to resolve with conventional imaging. By tracking these components across space and time, researchers can examine neuronal connectivity, intracellular transport, signaling, and structural changes associated with development or disease. The resulting measurements support mechanistic studies of brain function and the evaluation of cellular responses to experimental interventions.

Subcellular Resolution Imaging - Related Videos

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JoVE Journal - Biology

Super-Resolution Live Cell Imaging of Subcellular Structures

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Cited by 13 •

2021

Presented here is a protocol for super-resolution live-cell imaging in intact tissue. We have standardized the conditions for imaging a highly sensitive adult stem cell population in its native tissue environment. This technique involves balancing temporal and spatial resolution to allow for the direct observation of biological phenomena in live tissue.

Imaging Subcellular Structures in the Living Zebrafish Embryo

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Cited by 8 •

2016

Imaging the dynamic behavior of organelles and other subcellular structures in vivo can shed light on their function in physiological and disease conditions. Here, we present methods for genetically tagging two organelles, centrosomes and mitochondria, and imaging their dynamics in living zebrafish embryos using wide-field and confocal microscopy.

AFM-based Mapping of the Elastic Properties of Cell Walls: at Tissue, Cellular, and Subcellular Resolutions

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Cited by 39 •

2014

We describe a method to map mechanical properties of plant tissues using an atomic force microscope (AFM). We focus on how to record mechanical changes that take place in cell walls during plant development at wide-field mesoscale, enabling these changes to be correlated with growth and morphogenesis.

High-Resolution Confocal Imaging of Pathogen-Infected Drosophila Hemocytes

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2026

Source: Hiroyasu, A., et al. Extraction of Hemocytes from Drosophila melanogaster Larvae for Microbial Infection and Analysis. J. Vis. Exp. (2018)This video demonstrates high-resolution confocal imaging of Drosophila melanogaster hemocytes infected with Coxiella burnetii to visualize pathogen localization in 3D, enabling detailed analysis of intracellular infection dynamics and host-pathogen interactions.

Imaging Subcellular Calcium Dynamics in Neurons of Caenorhabditis elegans

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2025

Source: Doser, R., et al. Subcellular Imaging of Neuronal Calcium Handling In Vivo. J. Vis. Exp. (2023)This video demonstrates in vivo imaging of subcellular calcium flux in the ventral nerve cord neurons of transgenic Caenorhabditis elegans strains. Two distinct calcium indicators are employed: a cytoplasmic indicator in one strain and a mitochondrial indicator in another. Neurons are observed under a fluorescence microscope to monitor real-time changes in fluorescence intensity within the...

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