Uridine 5-fluoro-2-deoxyuridine

Uridine 5-fluoro-2-deoxyuridine, commonly called 5-fluoro-2′-deoxyuridine or FUdR, is a fluorinated pyrimidine nucleoside analog that disrupts DNA synthesis and serves as a useful experimental tool in cell biology and neuroscience. After entering cells, it is converted to fluorinated metabolites, including fluorodeoxyuridine monophosphate, which inhibits thymidylate synthase, depletes thymidine nucleotides, and limits DNA replication. In neuronal culture, researchers use FUdR to suppress proliferation of dividing non-neuronal cells, particularly glial cells, helping enrich neuron-focused preparations. Its concentration and exposure time require careful control because the compound can also impair cell survival and alter experimental outcomes.

Uridine 5-fluoro-2-deoxyuridine - Related Videos

Research

JoVE Journal - Biology

Determination of S-Phase Duration Using 5-Ethynyl-2'-deoxyuridine Incorporation in Saccharomyces cerevisiae

0 Views •

2022

We describe two complementary protocols to accurately determine S-phase duration in S. cerevisiae using EdU, a thymidine analog, which is incorporated in vivo and detected using Click chemistry by microscopy and flow cytometry. It allows for the easy characterization of the duration of DNA replication and overlooked replication defects in mutants.

Fluorescent In Situ Hybridization and 5-Ethynyl-2'-Deoxyuridine Labeling for Stem-Like Cells in the Hydrozoan Jellyfish Cladonema pacificum

0 Views •

Cited by 6 •

2022

Here, we describe a protocol for visualizing stem-like proliferating cells in the jellyfish Cladonema. Whole-mount fluorescent in situ hybridization with a stem cell marker allows for the detection of stem-like cells, and 5-ethynyl-2'-deoxyuridine labeling enables the identification of proliferating cells. Together, actively proliferating stem-like cells can be...

Use of the Pyrimidine Analog, 5-Iodo-2′-Deoxyuridine (IdU) with Cell Cycle Markers to Establish Cell Cycle Phases in a Mass Cytometry Platform

0 Views •

Cited by 1 •

2021

This protocol adapts cell cycle measurements for use in a mass cytometry platform. With the multi-parameter capabilities of mass cytometry, direct measurement of iodine incorporation allows identification of cells in S-phase while intracellular cycling markers enable characterization of each cell cycle state in a range of experimental conditions.

5-Ethynyl-2'-Deoxyuridine/Phospho-Histone H3 Dual-Labeling Protocol for Cell Cycle Progression Analysis in Drosophila Neural Stem Cells

0 Views •

Cited by 4 •

2021

Cell cycle analysis with 5-ethynyl-2'-deoxyuridine (EdU) and phospho-histone H3 (pH3) labeling is a multi-step procedure that may require extensive optimization. Here, we present a detailed protocol that describes all steps for this procedure including image analysis and quantification to distinguish cells in different cell cycle phases.

Studying Metabolic Brain Connectivity Using 2-Deoxy-2-[18F]Fluoro-D-Glucose Dynamic Positron Emission Tomography at the Single-subject Level

0 Views •

2025

The acquisition of dynamic positron emission tomography (PET) data and reconstruction into time frames allows for metabolic brain connectivity analysis at the single-subject level. We describe a method to acquire [18F]FDG dynamic PET data of the rat brain and obtain a connectivity matrix through the extraction of time-activity curves of volumes of interest.

View All Results

FAQs

Related Topics