Quantitative Susceptibility Mapping

Quantitative Susceptibility Mapping (QSM) is an MRI technique that estimates the magnetic susceptibility of tissue, providing a quantitative view of materials that alter the local magnetic field. It uses phase information from gradient-echo MRI to calculate field shifts, then applies phase unwrapping, background-field removal, and dipole inversion to generate a susceptibility map. In medicine, QSM can characterize iron, calcium, and blood products in the brain, supporting research into neurodegenerative disease, stroke, hemorrhage, and multiple sclerosis. Because susceptibility measurements reflect tissue composition, QSM may improve disease characterization, treatment monitoring, and understanding of pathological changes.

Quantitative Susceptibility Mapping - Related Videos

Research

JoVE EoE - Neuroimaging

Quantitative Susceptibility Mapping of a Human Brain Using Ex-Vivo Magnetic Resonance Imaging

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2025

Quantitative susceptibility mapping, or QSM, quantifies the magnetic susceptibility of brain tissue, which reflects its cellular composition, like myelin content.Begin by acquiring ex-vivo magnetic resonance imaging or MRI data of a fixed human brain hemisphere.Use 3D gradient magnetic fields to magnetize the tissue and collect signals at multiple time points or echoes to reduce background noise and artifacts and enhance the signals.Generate phase maps for all echoes, ensuring the removal of...

Education

JoVE Science Education - Engineering

Quantitative Strain Mapping of an Abdominal Aortic Aneurysm

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2023

Source: Hannah L. Cebull1, Arvin H. Soepriatna1, John J. Boyle2 and Craig J. Goergen1 1Weldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana 2Mechanical Engineering & Materials Science, Washington University in St. Louis, St Louis, Missouri The mechanical behavior of soft tissues, such as blood vessels, skin, tendons, and other organs, are strongly influenced by their composition of elastin and collagen, which provide elasticity and strength. The fiber...

Research

JoVE Journal - Medicine
Free Sample

Heterogeneity Mapping of Protein Expression in Tumors using Quantitative Immunofluorescence

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Cited by 27 •

2011

Here we describe a method to quantify molecular heterogeneity in histological sections of tumor material using quantitative immunofluorescence, image analysis, and a statistical measure of heterogeneity. The method is intended for use in clinical biomarker development and analysis.

Research

JoVE Journal - Biology
Free Sample

Simultaneous Mapping and Quantitation of Ribonucleotides in Human Mitochondrial DNA

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Cited by 5 •

2017

Here we describe a method amenable to simultaneously quantitate and genome-wide map ribonucleotides in highly intact DNA at single-nucleotide resolution, combining enzymatic cleavage of genomic DNA with its alkaline hydrolysis and subsequent 5´-end sequencing.

Fate Mapping

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2023

Fate mapping is a technique used to understand how embryonic cells divide, differentiate, and migrate during development. In classic fate mapping experiments, cells in different areas of an embryo are labeled with a chemical dye and then tracked to determine which tissues or structures they form. Technological improvements now allow for individual cells to be marked and traced throughout embryonic development and adulthood. This video reviews the concepts behind fate mapping, and then details a...

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