$$\rightleftharpoonup{xx}$$
$$\longleftharp{xx}$$,
$$\longrightharp{xx}$$,
Methodological approaches to stroke modeling
The methodological development of stroke animal models has spanned more than half a century. The core objective is to reproduce, as faithfully as possible, the pathophysiological processes of human stroke under experimental conditions while making explicit the trade-offs between construct validity, experimental control, and endpoint alignment. In practice, model selection should start from the clinical scenario and the primary readout, then balance feasibility and reproducibility. According to stroke type and clinical scenario, commonly used models can be grouped into four categories: ischemic models, hemorrhagic models, special-condition models, and large-animal and NHP models. Table 1 summarizes decision-relevant attributes (mechanistic focus, typical lesion profile, variability, and best-fit use cases) to support goal-directed model choice.
Ischemic stroke models
Ischemic stroke models aim to reproduce the loss of cerebral perfusion caused by LVO, distal emboli, microvascular occlusion, or systemic hypoperfusion. They are commonly used to interrogate infarct core–penumbra evolution, reperfusion injury, neuroprotection, and recovery. Because no single paradigm captures all clinical features, the key practical distinction is whether the model prioritizes experimental control (e.g., lesion topography and timing) or thromboembolic realism (e.g., clot biology and recanalization). Principal paradigms include intraluminal filament MCAO, thromboembolic models, photothrombosis, ET-1 vasoconstriction, and global ischemia/hypoxia–ischemia (HI).
Middle cerebral artery occlusion
Among ischemic paradigms, the intraluminal filament MCAO remains the most widely used and versatile small-animal technique. Originally described by Koizumi and refined by Longa, it enables permanent or transient focal ischemia without craniectomy, making it a practical workhorse for mechanistic and interventional studies9,10. In essence, a filament transiently interrupts MCA inflow, and occlusion duration serves as the main lever to tune injury severity and to model reperfusion26,27. Consequently, MCAO has been pivotal for delineating infarct core–penumbra dynamics and reperfusion injury biology, and it provides a commonly used experimental analogue of acute LVO followed by vessel reopening28.
Over time, refinements have focused less on procedural novelty and more on quality control and reproducibility. Physiological monitoring and confirmation of a robust cerebral blood flow reduction during occlusion (and recovery on reperfusion) are widely used to detect technical failure and reduce between-animal variability29,30,31. Across laboratories, transparent reporting of key parameters (animal characteristics, anesthetic/temperature control, occlusion duration, and exclusion criteria) is often more important for comparability than minor procedural variants29,30,31.
Limitations are equally well recognized. MCAO is operator-dependent and may lead to vascular injury and hemorrhagic complications, and off-target damage or dysregulated thermophysiology can confound outcomes if not monitored32,33. Moreover, collateral anatomy and strain differences contribute to variability in infarct size even under nominally identical conditions34. Finally, because MCAO is a mechanical occlusion rather than a thrombus-driven event, it is not optimal for directly testing thrombolysis or clot-targeting strategies; thromboembolic paradigms are better suited when clot biology and recanalization efficacy are central35,36. Taken together, MCAO is best positioned for: (i) controlled studies of focal ischemic pathobiology, and (ii) evaluation of adjunctive neuroprotection in the reperfusion era—provided that monitoring, prespecified criteria, and reporting rigor are in place.
Thromboembolic models
Thromboembolic paradigms reproduce the clinically relevant sequence of intravascular clot occlusion and spontaneous or therapy-induced recanalization, thereby offering high face validity for cardioembolic and selected atherothrombotic strokes. Their distinctive value is that clot biology and recanalization dynamics are built into the injury model, making them the preferred choice when the research question centers on thrombolysis, antithrombotic therapy, distal embolization, no-reflow, or hemorrhagic transformation. Contemporary preparations include (i) injection of preformed autologous clots into the internal carotid artery or directly into the MCA to generate large-artery embolic occlusion in rodents; (ii) in situ thrombin-triggered clot formation at the MCA origin, which enables tight control of occlusion timing and systematic testing of rt-PA; and (iii) endovascular, imaging-verified variants compatible with angiography, LDF, and MRI readouts35,37,38,39,40. Across these variants, confirmation of occlusion/recanalization (flow- or image-based) is central to interpreting efficacy endpoints and adverse events35,37,38,39,40,41.
Model choice within this class should be driven by the desired balance between thromboembolic realism and experimental controllability. Clot composition and delivery strategy influence occlusion stability, lesion topography, and lytic susceptibility35,38,39,40. Rather than enumerating all preparation parameters, a practical decision point is whether the study requires recanalization responsiveness: autologous or fibrin-rich clots enable thrombolysis studies, whereas inert embolic agents (e.g., microspheres) provide dose-defined shower embolization suited to modelling microinfarct burden and delayed lesion evolution, but are largely irreversible and therefore less informative for thrombolysis efficacy42,43,44,45,46. Upstream carotid injury models (e.g., FeCl₃-triggered thrombosis with downstream embolization) can support antithrombotic screening but typically yield greater heterogeneity in intracranial target vessels and lesion distribution47,48. For device development and peri-procedural biology, large-vessel embolic models in rabbits and swine uniquely enable fluoroscopic guidance and thrombectomy using human-scale catheters, complementing rodent thromboembolism for pharmacologic testing and systems-of-care questions41,49.
The chief limitations of thromboembolic models are variability and control. Compared with intraluminal filament MCAO, heterogeneity in clot lodging site, fragmentation, spontaneous lysis, and off-target embolization increases dispersion in infarct volume and neurological outcomes and can introduce multifocal lesions that complicate mechanistic inference37,38,39,42. Accordingly, studies benefit from prespecified inclusion/exclusion criteria (e.g., flow drop thresholds, angiographic occlusion confirmation), defined therapeutic windows, and harmonized rt-PA dosing and monitoring across species/strains, together with transparent reporting aligned with ARRIVE/STAIR principles37,39. When rigorously standardized, thromboembolic paradigms provide one of the most clinically concordant platforms for testing reperfusion pharmacotherapy and for dissecting recanalization-related injury mechanisms.
Photothrombosis
Photothrombosis combines systemic delivery of a photosensitizer (classically Rose Bengal) with focal cortical illumination to induce rapid, spatially confined microvascular thrombosis and circumscribed infarction. Introduced by Watson and colleagues, the method is minimally invasive (often transcranial), technically accessible, and yields highly reproducible cortical lesions without craniectomy, making it widely used for studies that require precise lesion targeting and low between-animal variability12. Within the broader model landscape, photothrombosis represents a high-control paradigm: it prioritizes spatial reproducibility and lesion geometry over thromboembolic realism and reperfusion physiology. Contemporary refinements—including standardized illumination conditions with strain-specific calibration and flow/imaging confirmation—further improve control over lesion size and location50. Spatially refined variants extend their utility, ranging from vessel-targeted photothrombotic injuries to single-vessel occlusion approaches that model microinfarcts with near cellular-scale resolution51,52,53,54. Collectively, these features confer excellent reproducibility and spatial targeting, with clinical correspondence to cortical microinfarcts and small, circumscribed infarcts.
Practically, the primary design choice is the desired spatial scale and depth of injury (territorial cortical lesion vs. microinfarct vs. single-penetrator occlusion), rather than procedural fine-tuning. Protocol parameters (photosensitizer dose, illumination geometry/exposure, skull preparation, and real-time flow confirmation) modulate infarct size and topography50, but for most applications, it is sufficient to report these variables transparently and to verify lesion placement/extent with standardized readouts. Several adaptations have been introduced to better approximate evolving or heterogeneous lesions, including paradigms that enlarge the peri-lesional vulnerable zone and ring-shaped illumination designs that generate a structured stroke-in-evolution geometry55,56. Depth-targeted photothrombosis (e.g., two-photon–guided vessel occlusion) enables mechanistic dissection of microvascular failure, collateral limits, perivascular inflammation, and blood–brain barrier (BBB) disruption with high spatial fidelity53,57.
Intrinsic limitations temper translational scope. Because photothrombosis drives immediate platelet-rich microvascular occlusion with early BBB disruption and minimal collateral recruitment, it typically yields little or no physiologic penumbra and responds poorly to rt-PA, limiting its utility for thrombolysis or reperfusion studies50,58. Lesions are largely cortical, with limited flexibility for deep territories unless specialized approaches are used52,53,54. Accordingly, photothrombosis is best positioned for studies where reproducible cortical topography is essential—such as cortical microinfarcts, circuit plasticity, rehabilitation-relevant remodeling, and BBB pathology—rather than for paradigms predicated on salvageable penumbra, large-vessel recanalization, or device-based reperfusion.
Endothelin-1 vasoconstriction
The ET-1 vasoconstriction model induces focal ischemia by stereotaxic microinjection of ET-1 adjacent to target cerebral vessels or into defined parenchymal regions (e.g., cortex, striatum, internal capsule)20,59,60,61. ET-1 activates ETA/ETB receptors on vascular smooth muscle and endothelium, causing rapid, dose-dependent luminal narrowing and a marked fall in rCBF, typically followed by gradual, spontaneous reperfusion as the peptide dissipates20,59,60,62. Within the ischemic-model spectrum, ET-1 is a precision targeting paradigm: it is most useful when lesion location (including subcortical/white-matter–predominant injury) and reproducible behavioral phenotypes are the primary objectives. Accordingly, ET-1 approaches can generate subcortical or internal-capsule–centered injuries that yield consistent sensorimotor deficits and are often used as experimental analogues of lacunar syndromes61,63,64. Compared with intraluminal filament MCAO, ET-1 modeling is technically straightforward and minimally invasive (typically requiring only a small burr hole), and it can be implemented in awake or lightly anesthetized paradigms to reduce anesthesia-related confounds when behavioral recovery is a key endpoint20,59,60.
For most study designs, the major practical design choice is the intended territory (cortical–striatal vs. deep motor pathways) rather than the specific delivery variant. ET-1 can be targeted perivascularly in the MCA territory to approximate cortical–striatal injury or delivered to deep structures (e.g., internal capsule) to model focal motor pathway damage with persistent deficits60,61,62,65. While injection dose and volume modulate the depth and duration of vasoconstriction, aggressive dosing can increase variability and mortality, so titration and prespecified inclusion/exclusion criteria are critical for reproducibility62. Species and strain differences also affect responsiveness, with mice often showing attenuated vasoconstriction relative to rats, underscoring the need for pilot calibration and transparent reporting of coordinates, dose/volume, anesthesia/temperature control, and physiological monitoring20,59,60,66,67. Where feasible, flow confirmation (or standardized imaging-based lesion verification) strengthens interpretability and cross-study comparability20,59,60,68.
Limitations reflect the model’s underlying pathophysiology. ET-1 induces vasospasm rather than intraluminal thrombosis, and therefore does not capture clot-driven occlusion, thrombolytic responsiveness, or device-mediated recanalization20,59,60. Peptide diffusion can contribute to off-target vasoconstriction and non-ischemic effects, and the resulting ischemic territory may exhibit a restricted or atypical penumbra compared with embolic large-vessel occlusion20,37,59,60. Taken together, ET-1 is best positioned for mechanistic and rehabilitation-oriented studies that require anatomically specific cortical or deep lesions (including white-matter–predominant injury), while being less suitable for studies centered on clot biology, thrombolysis, or endovascular reperfusion. When paired with rigorous monitoring and transparent reporting aligned with STAIR/ARRIVE principles, ET-1 remains a valuable platform for modelling small-vessel disease–relevant phenotypes and circuit-specific recovery20,60,61,64.
Global ischemia/Hypoxia-ischemia
Global ischemia models interrogate brain injury resulting from systemic hypoperfusion or oxygen deprivation and are foundational for studies of post–cardiac arrest encephalopathy and neonatal HIE. Within the stroke-model landscape, their defining feature is a whole-brain (or forebrain-predominant) ischemic insult with reperfusion, making them best suited to questions of selective neuronal vulnerability, global reperfusion injury, and system-level neuroprotection (e.g., targeted temperature management), rather than territory-specific large-vessel occlusion biology. In adult rodents, transient forebrain ischemia is commonly induced by vertebral/carotid occlusion paradigms or by carotid occlusion combined with controlled hypotension, which produces delayed neuronal death in hippocampal CA1 and other vulnerable regions and recapitulates key features of cardiac arrest–reperfusion injury8,69,70,71,72. Mouse adaptations of forebrain ischemia and standardized protocols have improved feasibility and monitoring in small animals73,74,75. Because collateral anatomy strongly shapes injury patterns, species and strain selection is not a mere logistical choice but a determinant of lesion distribution and reproducibility74,76. For perinatal injury, the Rice–Vannucci paradigm (unilateral carotid ligation followed by systemic hypoxia in early postnatal life) remains the most widely used small-animal model of neonatal HIE and supports mechanistic and interventional studies across developmental stages18,77,78.
Methodological refinements have expanded versatility and rigor by emphasizing physiological control and standardized readouts over procedural variation. In adult global ischemia, consistency in ischemia duration, blood pressure targets, temperature control, and verification of cerebral hypoperfusion (flow- or electrophysiology-based) reduces variability and mortality8,70,75. Cardiac arrest/cardiopulmonary resuscitation (CA/CPR) models introduce defined no-flow and low-flow intervals to interrogate postarrest pathophysiology and temperature-based neuroprotection, and simplified induction approaches have lowered technical barriers in mice79,80,81. In neonatal HI, injury severity is commonly titrated by hypoxia intensity and exposure duration (with careful control of temperature), enabling systematic study of white-matter vulnerability, inflammation, and long-term neurobehavioral trajectories that align with clinically relevant HIE outcomes77,78.
Limitations reflect both biology and technique. Mortality can be substantial in severe CA/CPR or prolonged global ischemia, and injury topography varies with collateral anatomy, systemic physiology, anesthesia, and temperature control8,71,72,73,74,75,76. Accordingly, global ischemia and neonatal HI studies are particularly sensitive to methodological drift across laboratories, reinforcing the need for prespecified physiological targets, standardized monitoring, and transparent reporting. By design, these models lack large-artery thrombus biology and are therefore not suitable for evaluating thrombolysis or device-mediated recanalization; instead, they are best aligned with mechanistic studies of reperfusion injury and selective vulnerability, and with interventions such as hypothermia/targeted temperature management in postarrest encephalopathy and neonatal HIE, where hypothermia remains a clinical standard for moderate–severe cases81,82. In sum, global ischemia and neonatal HI paradigms complement focal LVO and embolic models by addressing distinct, clinically important scenarios that are otherwise poorly captured in territory-based stroke preparations.
Hemorrhagic stroke models
Hemorrhagic stroke encompasses ICH, SAH, and epidural hemorrhage (EDH, less commonly studied in stroke research), which pose distinct biological and translational challenges compared with ischemic stroke, including hematoma-related mass effect, blood-product toxicity, and secondary inflammatory injury. ICH and SAH, therefore, represent the principal focus of preclinical hemorrhagic modeling.
Intracerebral hemorrhage models
Among hemorrhagic stroke paradigms, ICH models are central for dissecting hematoma formation/expansion, mass effect, perihematomal edema, and blood-derived neurotoxicity. Accordingly, the most important design decision is whether the study aims to model a fixed-volume clot, progressive bleeding, or a specific coagulation-linked pathway. The two workhorse preparations are (i) autologous blood injection, which stereotaxically introduces whole blood—most commonly into the striatum—to generate a space-occupying hematoma, and (ii) bacterial collagenase injection, which enzymatically degrades the microvascular basal lamina to provoke progressive bleeding that better captures dynamic hematoma growth14,15,83. Autologous blood injection is technically accessible and offers direct control of hematoma volume and composition, making it well aligned with questions centered on mass effect, clot burden, and blood-product–driven secondary injury84,85,86. In contrast, collagenase models better approximate ongoing bleeding and evolving edema, which are clinically relevant to hematoma expansion and secondary injury cascades, but the enzymatic component can introduce confounds (matrix proteolysis and exaggerated BBB disruption) and may amplify inflammation and mortality in a dose-dependent manner14,15,83,87,88,89.
A third, more reductionist approach is thrombin injection, which reliably elicits edema, microglial activation, and protease-activated receptor (PAR) signaling; it is well suited to probing coagulation-linked pathways but does not reproduce vessel rupture, hematoma mechanics, or expansion dynamics and therefore has limited fidelity to spontaneous ICH90,91. Across ICH models, pathology and readouts depend on hemorrhage location and burden and on how secondary injury is captured over time15,85,86,87,88. Contemporary guidance therefore emphasizes a priori alignment of model and endpoint—for example: autologous blood injection for mass effect and blood-product toxicity; collagenase for hematoma expansion and edema evolution; and thrombin for PAR/coagulation signaling—together with ARRIVE/STAIR-aligned reporting to improve rigor and reproducibility83,89,92.
No single ICH model recapitulates the full human spectrum. Autologous blood lacks ongoing vessel rupture and may exhibit variable clot resorption; collagenase may overrepresent enzymatic injury; and thrombin isolates a single mediator. Nevertheless, when rigorously standardized—and paired with appropriate endpoints (edema, iron/hemoglobin–heme toxicity, neuroinflammation, functional deficits)—these complementary paradigms provide robust platforms for mechanistic discovery and preclinical testing of hemostatic agents, iron chelation, anti-edema strategies, and neurorestorative interventions93.
Subarachnoid hemorrhage models
Preclinical SAH research relies on three principal rodent paradigms that balance construct validity, technical feasibility, and outcome reproducibility. A practical starting point is the dominant biological question—EBI after rupture versus blood-exposure–driven vasospasm/delayed cerebral ischemia (DCI)—because no single model optimally captures both. EVP uses an intraluminal filament to rupture an intracranial artery, producing an abrupt rise in intracranial pressure (ICP), a sharp fall in cerebral blood flow (CBF), diffuse basal cisternal clot, and high early mortality—features that most closely mimic aneurysmal rupture and EBI in patients16,17. Accordingly, EVP is best positioned for rupture-proximal mechanisms (ICP/CBF crisis, global ischemia components, acute neuroinflammation), while acknowledging higher variability in hemorrhage burden and early survival. Outcome variability arises from differences in perforation depth, filament tip geometry, vascular target, and physiologic control; severity grading and standardized confirmation of hemorrhage burden (e.g., basal cistern clot scoring and imaging-based scales) improve interpretability and support downstream analyses of vasospasm and DCI94,95.
In contrast, blood-injection models prioritize controlled exposure to subarachnoid blood. Cisterna magna (CM) blood injection provides technical simplicity and high reproducibility by delivering a defined volume of autologous blood into the subarachnoid space, facilitating controlled investigations of blood-product neurotoxicity, inflammation, and large-artery narrowing; however, it lacks rupture dynamics and EBI physiology96,97. Prechiasmatic cistern injection (including modern double-injection mouse variants) offers an intermediate option that deposits clot around the circle of Willis and anterior circulation with manageable mortality and consistent vasospasm, though it still omits the rupture event96,97. Thus, CM and prechiasmatic paradigms are most useful when vasospasm/DCI signaling, blood-breakdown products, and inflammatory trajectories are primary endpoints, whereas EVP is preferred when rupture realism and acute EBI are central.
Across paradigms, contemporary best practices emphasize physiological control and endpoint verification rather than incremental procedural variants: perioperative temperature and blood-pressure control, CBF/ICP monitoring when feasible, and imaging-based confirmation of hemorrhage location and burden to reduce misclassification17,98. Given the field’s translational challenges, incorporating multimodal and longitudinal endpoints (behavioral recovery, imaging markers, vascular narrowing, and inflammatory readouts) can better align preclinical SAH work with clinically meaningful outcomes. Procedural refinements that stabilize injury severity (e.g., standardized perforation approaches and strain/sex-aware design) may reduce early mortality and improve comparability across laboratories17,99. Large-animal models remain valuable for device testing and angiographic vasospasm endpoints, but are used selectively due to cost and ethics100. Overall, EVP captures aneurysmal rupture and acute EBI most directly, whereas CM and prechiasmatic injections provide controlled blood-exposure platforms for vasospasm/DCI-focused studies; in all cases, rigorously standardized severity grading and transparent reporting are essential to narrow translational gaps, particularly for DCI biology and long-term outcomes.
Epidural hemorrhage models
EDH models are infrequently used in stroke research because EDH is predominantly traumatic rather than spontaneous; nevertheless, they provide experimentally controlled platforms to study space-occupying mass lesions, ICP–cerebral perfusion pressure (CPP) coupling, and monitoring/evacuation strategies that overlap with critical-care management relevant to severe hemorrhagic brain injury. Two principal approaches are commonly used. First, balloon epidural expansion uses an epidural balloon that is incrementally inflated to achieve prespecified ICP levels, enabling highly controllable and reproducible titration of mass effect and facilitating standardized physiological and imaging endpoints101,102. Second, autologous blood injection introduces a defined volume of fresh blood into the epidural space to form a hematoma, incorporating clot biomechanics and blood-related secondary injury signals but typically with greater variability in hematoma geometry and ICP trajectories103,104. Large-animal adaptations—most recently a swine EDH model that mirrors clinical progression and facilitates translational device testing—extend compatibility with neuromonitoring and image-guided evacuation trials105.
The key trade-off mirrors that seen across hemorrhagic paradigms: control versus biological realism. Balloon expansion provides unmatched repeatability for studying ICP/CPP dynamics and the timing of decompression, but it lacks the hemostatic and inflammatory milieu associated with real blood, whereas blood-injection EDH models capture clot-related effects while sacrificing stability and precision101,102,103,104,105. Accordingly, contemporary reviews most often position EDH paradigms as tools for interrogating mass-lesion pathophysiology, neuromonitoring calibration, and surgical timing rather than mechanisms specific to spontaneous cerebrovascular stroke106. Emerging therapeutics (e.g., anti-HMGB1 monoclonal antibodies) have been explored in rat EDH, underscoring the utility for testing anti-inflammatory interventions under defined mass-effect conditions107. Overall, EDH models have limited translational relevance to stroke per se, but they remain useful for questions centered on space-occupying extra-axial hematomas, ICP-CPP physiology, and surgical/monitoring strategies.
Special-condition models
Beyond classical ischemic and hemorrhagic paradigms, several special condition models address clinically important, less common scenarios in cerebrovascular disease. These models are most valuable when the clinical question is not territorial infarction size, but rather vascular lesion evolution (aneurysm/AVM), chronic hypoperfusion and white-matter injury, developmental vulnerability, or post-stroke sequelae—often requiring longitudinal and multimodal endpoints.
Cerebral aneurysm induction
Intracranial aneurysm (IA) models typically combine hemodynamic and wall-weakening stimuli—most often pharmacologic hypertension with stereotaxic elastase delivered to the basal cistern or circle of Willis—to induce aneurysm initiation and, in some variants, rupture; related approaches add unilateral carotid flow alteration or carotid–branch ligations to augment wall shear stress108,109,110,111,112. Conceptually, these paradigms are best positioned for mechanistic studies of aneurysm formation/instability (inflammation, extracellular-matrix remodeling) and for preclinical evaluation of endovascular or anti-inflammatory strategies using longitudinal imaging readouts. Because rupture is variably achieved and sensitive to background physiology, standardized severity metrics and imaging-based follow-up are critical for interpretability and cross-study comparison.
Arteriovenous malformation models
Brain arteriovenous malformation (bAVM) models fall into two broad families with distinct strengths. Genetic/angiogenic paradigms delete Alk1 or Eng in endothelium and apply focal VEGF to trigger nidus formation and high-flow shunting that recapitulate many human features; newer inducible/localized systems improve survival and lesion control for longitudinal studies113,114,115,116. Surgical shunt/anastomosis constructs (artery-to-vein) remain useful where anatomy or device testing is the priority, albeit with lower construct validity for spontaneous bAVM pathogenesis. Therefore, genetic/angiogenic models are preferred for pathobiology and medical therapy questions, whereas shunt models are best used for workflow/device evaluation and controlled hemodynamic studies.
Chronic hypoperfusion
Chronic cerebral hypoperfusion models, used to study subcortical VCI and white-matter injury, include bilateral CCA stenosis (BCAS) in mice, bilateral carotid occlusion/stenosis in rats, and device-assisted stenosis or balloon approaches in larger species. BCAS reliably produces progressive white-matter rarefaction, gliosis, and executive/working-memory deficits; asymmetric or low-cost BCAS variants improve MRI compatibility and titration of severity117,118,119,120,121. Large-animal adaptations permit invasive monitoring and clinical-style imaging, but require continued standardization of stenosis severity, longitudinal endpoints, and reporting practices.
Developmental stroke
Developmental stroke models address the unique vulnerability of the immature brain and the distinct trajectories of injury and recovery. The Rice–Vannucci neonatal HI paradigm remains the workhorse in rodents and supports mechanistic and interventional studies across developmental stages; complementary large-animal neonatal HI models (e.g., piglet) offer gyrencephalic anatomy, clinically relevant neurophysiology (including seizures), and compatibility with longitudinal imaging, supporting translational evaluation of therapeutic hypothermia and adjunct strategies77,122,123. In this context, long-term neurobehavioral outcomes and developmental milestones are essential endpoints, not optional add-ons.
Post-stroke complications
Post-stroke complications are modeled to reflect long-term outcomes beyond acute infarction. Post-stroke epilepsy has been reproduced after focal ischemia (e.g., MCAO, photothrombosis) with late epileptiform activity and biomarker readouts; post-stroke depression is often modeled by combining MCAO with chronic stress to enhance face validity; post-stroke dysphagia paradigms leverage focal cortical/brainstem lesions with quantitative swallowing assays; and networks underlying post-stroke cognitive impairment are increasingly assessed with multimodal behavior and systems-neuroscience endpoints124,125,126,127,128. Their major strength is endpoint relevance (functional recovery and chronic symptoms), whereas their major limitation is heterogeneity and sensitivity to background factors (age, sex, stress exposure, immune state, and baseline cognition), which complicates standardization. Consequently, these models benefit from longitudinal, multimodal phenotyping (behavior, imaging, electrophysiology, and inflammatory markers) and from transparent reporting of inclusion criteria and attrition. More broadly, incorporating aging, sex as a biological variable, and comorbidity-enriched backgrounds can improve translational fidelity for post-stroke sequelae, particularly where immune–brain interactions and systemic illness shape recovery trajectories.
Large-animal and non-human primate models
Although rodent paradigms dominate preclinical stroke research, large animal and NHP models are essential for bridging to clinical practice. Dogs, pigs, and sheep offer gyrencephalic brains, higher white-matter content, human-scale vessels, and compatibility with clinical MRI/CT, angiography, and endovascular workflows—features that enable realistic LVO modeling and device testing43,129,130. In practice, large animals are most useful for late-stage validation, catheter/device feasibility, and clinically realistic peri-procedural physiology, rather than early mechanism screening. In sheep, reproducible permanent or transient MCA occlusion can be produced through microsurgical exposure with clip application or coagulation, permitting longitudinal neuroimaging, ICP monitoring, and assessment of malignant edema131,132,133,134. Swine models increasingly use minimally invasive or endovascular approaches to recapitulate clinical imaging signatures and facilitate intra-arterial therapy studies, addressing historical limitations imposed by the rete mirabile37,43,134,135. Large animals also support hemorrhagic paradigms in anatomically relevant contexts; for example, the canine double-hemorrhage SAH model remains a workhorse for delayed vasospasm and imaging-based biomarker work136.
NHP models (macaques, baboons) provide the closest anatomical, physiological, immunogenomic, and behavioral correspondence to humans. Reversible or permanent endovascular MCAO, autologous-clot embolization, and targeted cortical infarction have been standardized with multimodal MRI, yielding clinically familiar diffusion–perfusion dynamics and enabling study of complex endpoints such as fine motor control, network reorganization, and higher cognition137,138,139,140. Recent NHP studies integrate neuroimaging, quantitative behavior, and serum proteomics, and they reveal mesoscale network remodeling after stroke—outcomes that are difficult to capture outside primate systems139,140. These strengths, however, come with constraints: cost, colony availability, and stringent ethical/regulatory oversight (3Rs, refinement of anesthesia/analgesia, and justification of translational value) typically reserve NHP and large-animal work for late-stage validation, comparative efficacy, and device/procedural optimization rather than early mechanism screening141,142. In sum, when used judiciously and reported rigorously, large-animal and NHP models function as a critical translational bridge linking rodent discoveries to human stroke interventions43,129,130.
Variable control and methodological quality
Outcomes in experimental stroke are critically shaped by biological variables that mirror clinical heterogeneity. Age, sex, strain, and common comorbidities (e.g., hypertension, diabetes, dyslipidemia, smoking exposure) alter cerebrovascular anatomy, inflammatory tone, and ischemic tolerance, thereby shifting infarct size, edema, hemorrhagic transformation, and recovery trajectories34,143,144. Strain-dependent differences in the circle of Willis and collateralization introduce systematic variance even under standardized protocols34. Because these factors influence not only acute injury but also longitudinal recovery, they should be treated as design variables rather than post hoc explanations. Sex is a major modifier across the life span; aged females and males display distinct immune and barrier responses after stroke, supporting routine inclusion of both sexes and sex-specific analyses consistent with NIH SABV policy144,145. Where feasible, factorial or stratified designs and prespecified covariate strategies can improve external validity and clarify effect modification143.
Methodological rigor should follow contemporary guidance (ARRIVE 2.0, STAIR, SRRR). Core elements include randomization, allocation concealment, blinded outcome assessment, prespecified inclusion/exclusion criteria, and justified sample-size calculations/power analyses; failure in these domains inflates effect sizes and undermines reproducibility146,147,148. To support cross-study synthesis and translation, reporting should prioritize decision-critical parameters—for example, injury induction timing/duration, physiological targets and deviations, attrition and exclusions, and prespecified primary endpoints—together with transparent documentation of analytic choices. Multi-model validation and, when possible, cross-laboratory replication provide a practical stress test for robustness before clinical trial escalation24,148.
Perioperative care is a major source of variance. Continuous temperature monitoring with feedback control is essential to avoid inadvertent hypothermia/hyperthermia, which confounds infarct metrics and behavior149. Anesthetic regimens can carry intrinsic neurovascular effects (e.g., isoflurane-mediated cerebroprotection or hemodynamic shifts); protocols should standardize agent, dose, timing, and ventilation/oxygenation and justify deviations150,151. Physiologic monitoring of blood gases, blood pressure, glucose, and rCBF is encouraged; hyperglycemia worsens infarction and BBB leakage and should be prevented or accounted for analytically152,153,154. Humane analgesia is mandatory; because analgesics can modulate inflammatory tone, investigators should report drug choice and timing explicitly and consider pilot checks for model neutrality151,155.
Finally, outcome selection should privilege clinically interpretable recovery alongside tissue metrics. A staged battery spanning sensorimotor, cognitive/affective domains when relevant, and longitudinal time points better reflects clinical endpoints and SRRR recommendations148,156,157. Increasingly, multimodal phenotyping (behavioral batteries paired with imaging, electrophysiology, and inflammatory/vascular biomarkers) provides a more mechanistically anchored and translationally aligned endpoint framework than infarct volume alone. Where feasible, multicenter preclinical studies and harmonized core outcomes (with shared SOPs and blinded central analysis) can further improve reproducibility and raise the ceiling for clinical translation24,158,159.
Translational relevance and guidelines
The persistent bench-to-bedside gap in stroke has driven consensus frameworks that couple methodological rigor to translational alignment. The STAIR initiative (latest comprehensive update: STAIR XI) prioritizes dose–response and therapeutic time-window studies, inclusion of both permanent and transient ischemia with reperfusion paradigms, multi-species/multi-model replication, and—critically—long-term functional outcomes as primary endpoints to mirror clinical trials24. ARRIVE 2.0 complements STAIR by specifying design and reporting standards that reduce bias and improve reproducibility (sample-size justification, randomization, blinding, statistical transparency, prespecified inclusion/exclusion criteria)146. SRRR recommendations further emphasize recovery-oriented outcomes and harmonized assessments that can be mapped to clinical function148,156,157. Collectively, these frameworks converge on a practical translational logic: prespecify what success means, test robustness across plausible clinical conditions, and report in a way that enables replication and meta-synthesis. Despite progress, audits indicate variable adherence across the literature, motivating explicit protocol preregistration and transparent reporting of negative findings to curb publication bias147,154.
Clinical relevance improves when preclinical cohorts model patient realities. Priorities include systematic incorporation of aging, hypertension, diabetes/metabolic dysfunction, and sex as a biological variable—each shaping cerebrovascular physiology, infarct evolution, immune–brain interactions, and treatment response34,143,144. Rather than treating comorbidity-enriched designs as optional add-ons, translational pipelines can use staged validation: begin with controlled cohorts for mechanistic clarity, then escalate to aged/comorbid and both-sex cohorts to evaluate effect modification and safety. Translational pathways also benefit from bridging across species: rodents for mechanistic discovery and early screening; large animals (e.g., swine, ovine) for gyrencephalic anatomy, human-scale vasculature, and interventional workflows; and NHP for higher-order behavior and network-level recovery, typically reserved for late-stage validation and device/procedural optimization given cost and ethics37,43,129,138,140.
Standardization of multimodal endpoints strengthens alignment with clinical trials. Combining neuroimaging (e.g., structural/DTI, perfusion/diffusion, fMRI), quantitative neurobehavior, and histopathology—ideally within multicenter preclinical networks—enables robust go/no-go decisions before first-in-human studies24,148,156,157,158,159. Harmonized core outcome sets and shared SOPs can reduce interpretive flexibility and enable cross-laboratory comparability, especially when paired with blinded analysis. Randomized, blinded multicenter designs in animals have already demonstrated their value in stress-testing candidate therapies and exposing lab-specific effects that single-center studies may miss158,159. In practice, adherence to STAIR/ARRIVE/SRRR, deliberate modeling of age/sex/comorbidity, scenario-matched model selection, and multimodal, function-centered endpoints together provide a credible route to reduce late-stage translational failure.
Challenges and future directions
Despite decades of refinement, preclinical stroke models still face three structural limitations that blunt translational impact: (i) heterogeneity and reproducibility, (ii) under-modeling of clinical complexity, and (iii) short-term, tissue-centric endpoints. Inter-laboratory variance arises from surgical expertise, strain choice, occlusion technique, perioperative care, and outcome readouts; even within widely used paradigms such as filament MCAO, small procedural differences interact with collateral anatomy to produce materially different lesion distributions, attrition, and treatment effects, complicating multicenter replication and go/no-go decisions34,146,147,154,158. Clinical complexity remains underrepresented because most studies rely on young, otherwise healthy rodents; yet aging, hypertension, diabetes/metabolic dysfunction, and sex shape cerebrovascular physiology, immune–brain interactions, and treatment response. These variables are still inconsistently modeled, diminishing external validity24,146,158. Finally, endpoints often emphasize acute lesion metrics over months-long functional recovery, rehabilitation responsiveness, and neuropsychiatric sequelae, in contrast to clinical trials24,146,158. Taken together, the field’s central challenge is not the absence of models, but the absence of scenario-matched, endpoint-aligned validation pipelines.
Standardization and harmonization remain priorities. Consensus frameworks (ARRIVE 2.0; STAIR XI; emerging multicenter PRISM guidance) call for randomization, allocation concealment, blinded assessment, a priori sample-size justification, transparent reporting of inclusion/exclusion criteria, prespecified endpoints, and cross-model/cross-laboratory replication—practices that reduce inflated effect sizes and facilitate credible translation24,146,147,158. A practical next step is broader adoption of harmonized common data elements and core outcome sets, enabling cross-study synthesis and reducing interpretive flexibility. Multicenter preclinical consortia and common data elements are increasingly advocated to stress-test robustness before first-in-human studies158.
Emerging technologies provide credible routes to address the above constraints when integrated into coherent validation strategies. First, comorbidity-enriched, genetic, and humanized models can improve construct validity for specific therapeutic classes. Gene-editing approaches enable modeling of vascular risk and small-vessel disease biology (e.g., NOTCH3; COL4A1/A2), and humanized immune systems can support mechanistic evaluation of immunomodulatory interventions in vivo34,160,161,162,163,164,165,166. Second, human-derived experimental systems can serve as scalable translation bridges, not replacements. Vascularized brain organoids, microphysiological platforms, and organotypic/ex vivo preparations subjected to oxygen–glucose deprivation enable human-cell interrogation and screening; when used bidirectionally with in vivo models, they can confirm conserved mechanisms and de-risk targets that fail to generalize across systems161,162,163. Third, multi-omics and systems biology approaches—particularly cross-species profiling anchored to patient cohorts—can identify conserved injury–repair programs and candidate biomarkers that better connect animal results to clinical phenotypes167. Fourth, AI/ML methods are increasingly practical in preclinical pipelines, enabling automated behavioral quantification, harmonized imaging readouts, and prediction of functional outcomes, thereby reducing measurement noise and supporting richer longitudinal endpoints168,169,170. Critically, these tools add translational value only when paired with prespecified endpoints and standardized acquisition/analysis pipelines.
Ethics and the 3Rs (Replacement, Reduction, Refinement) remain foundational. Replacement via organoids, microphysiological systems, and in silico models can triage candidates before in vivo testing; reduction and refinement through optimized analgesia/anesthesia, telemetry-guided homeostasis, and standardized monitoring improve welfare and data quality. Operationalizing the 3Rs should be viewed as a rigor strategy as well as an ethical obligation, because improved welfare often reduces variance and attrition.
Progress will depend on integrated, multi-model, multi-species, multimodal roadmaps. One pragmatic pipeline is staged validation: discovery and mechanism in controlled rodent cohorts; replication across complementary models (e.g., controlled focal ischemia plus thromboembolic realism, or fixed-volume ICH plus expansion-prone ICH); escalation to aged/comorbid and both-sex cohorts; and targeted bridging in large animals and, when justified, NHPs for clinical workflow/device realism and higher-order recovery endpoints. Parallel human-cell systems (organoids/slices), omics-anchored target selection, and AI-assisted outcome analytics can provide mechanistic depth and endpoint richness across stages. Coupled with ARRIVE/STAIR-aligned rigor and explicit model-selection logic (Table 1), this staged, scenario-matched strategy offers a credible path to narrowing the translational gap and accelerating effective therapies for stroke.