Nucleotide Regulation

Nucleotide regulation is the coordinated control of nucleotide synthesis, recycling, degradation, and distribution, maintaining the building blocks required for DNA and RNA production and cellular energy transfer. Cells balance nucleotide pools through de novo synthesis and salvage pathways, while end products such as ATP, GTP, and other nucleotides inhibit or activate biosynthetic enzymes through feedback and allosteric control. This regulation also links nucleotide availability to DNA replication, RNA transcription, cell growth, and metabolic signaling. Understanding these pathways helps explain genome stability, developmental processes, and disease mechanisms, while informing research on antimicrobial and anticancer therapies that target nucleotide metabolism.

Nucleotide Regulation - Related Videos

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JoVE Core - Molecular Biology

GTPases and their Regulation

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2020

Guanine nucleotide-binding proteins (G-proteins), also known as GTPases, are a superfamily of proteins that regulate many cellular processes, such as cell signaling, vesicular transport, and the regulation of cell shape and motility. Mutation or dysfunction of these proteins can lead to disease. There are around 40,000 known G-proteins that can broadly be classified into two groups ‒ small G-proteins consisting of a single domain and large multi-domain G-proteins. Large G-proteins, also known...

Cooperative Binding of Transcription Regulators

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2020

Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome. Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form dimers that...

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JoVE Journal - Biology
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iCLIP - Transcriptome-wide Mapping of Protein-RNA Interactions with Individual Nucleotide Resolution

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Cited by 203 •

2011

The spatial arrangement of RNA-binding proteins on a transcript is a key determinant of post-transcriptional regulation. Therefore, we developed individual-nucleotide resolution UV crosslinking and immunoprecipitation (iCLIP) that allows precise genome-wide mapping of the binding sites of an RNA-binding protein.

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JoVE Core - Molecular Biology
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Nucleotide Excision Repair

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2020

Exposure to mutagens can damage DNA and result in bulky lesions that distort the double-helix structure or impede proper transcription. Damaged DNA can be detected and repaired in a process called nucleotide excision repair (NER). NER employs a set of specialized proteins that first scan DNA to detect a damaged region. Next, NER proteins separate the strands and excise the damaged area. Finally, they coordinate the replacement with new, matching nucleotides.DNA distortion and damageCells are...

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JoVE Core - Cell Biology
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Nucleotide Excision Repair

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2023

DNA Distortion and Damage Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...

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