Protein Dimerization

Protein dimerization is the association of two protein molecules into a functional unit, a process that can regulate structure, activity, localization, and cellular signaling. Dimer formation occurs when complementary surfaces interact through noncovalent forces such as hydrogen bonding, ionic interactions, and hydrophobic effects, or through covalent links such as disulfide bonds; the partners may be identical, forming a homodimer, or different, forming a heterodimer. By creating or stabilizing functional binding sites, dimerization can control enzyme activity, DNA binding, receptor signaling, and protein assembly. Studying these interactions helps explain cellular regulation and supports research into diseases caused by abnormal protein complexes.

Protein Dimerization - Related Videos

Research

JoVE Journal - Biology

Chemical Dimerization-Induced Protein Condensates on Telomeres

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Cited by 10 •

2021

This protocol illustrates a chemically induced protein dimerization system to create condensates on chromatin. The formation of promyelocytic leukemia (PML) nuclear body on telomeres with chemical dimerizers is demonstrated. Droplet growth, dissolution, localization and composition are monitored with live cell imaging, immunofluorescence (IF) and fluorescence in situ hybridization (FISH).

Research

JoVE Journal - Biology
Free Sample

Visualization of ATP Synthase Dimers in Mitochondria by Electron Cryo-tomography

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Cited by 43 •

2014

We present a protocol of how to collect and process electron cryo-tomograms of whole mitochondria. The technique provides detailed insights into the structure, function, and organization of large membrane protein complexes in native biological membranes.

Creating Highly Specific Chemically Induced Protein Dimerization Systems by Stepwise Phage Selection of a Combinatorial Single-Domain Antibody Library

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Cited by 3 •

2020

Creating chemically induced protein dimerization systems with desired affinity and specificity for any given small molecule ligand would have many biological sensing and actuation applications. Here, we describe an efficient, generalizable method for de novo engineering of chemically induced dimerization systems via the stepwise selection of a phage-displayed combinatorial single-domain antibody library.

Education

JoVE Core - Molecular Biology

Protein-protein Interfaces

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2020

Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals

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Cited by 5 •

2019

We present protocols for the isolation of stable heterocyclic carbenes. The synthesis of a cyclic (alkyl)(amino) carbene (CAAC) and an N-heterocyclic carbene (NHC) is demonstrated using filter cannulas and Schlenk technique. We furthermore present the synthesis of the related oxygen-sensitive, electron-rich mixed “Wanzlick dimer” and the reduced stable organic radical.

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