Brain Tissue Water Influx

Brain tissue water influx is the movement of water into neural tissue, a process that can alter cellular volume, tissue pressure, and brain function. It occurs when osmotic or hydrostatic gradients draw water across cell membranes, often through aquaporin channels, following changes in ion and solute concentrations. In neuroscience, studying this process helps explain cytotoxic and vasogenic brain edema after injury, stroke, infection, or metabolic disruption. Measuring water movement and its effects on neurons, glial cells, and the blood-brain barrier supports research into disease mechanisms, imaging biomarkers, and potential strategies for limiting secondary brain damage.

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Frozen Mouse Brain Tissue Sectioning: A Procedure to Obtain Thin Frozen Tissue Sections from Frozen Murine Brain Tissue

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2023

In this video, we demonstrate the sectioning of a frozen mouse brain tumor tissue using a cryostat. The frozen brain tissue sections so obtained are stored at low temperatures until further analysis.

A Hydrophobic Tissue Clearing Method for a Rat Brain Tissue Sample

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2025

Source: Kirchner, K.N., et al., A Hydrophobic Tissue Clearing Method for Rat Brain Tissue. J. Vis. Exp. (2020).This video demonstrates the method of hydrophobic tissue clearing of a rat brain tissue sample. The sample is sequentially dehydrated in methanol, treated with a dichloromethane and methanol mixture to dissolve lipids and pigments, and transferred to dibenzyl ether for complete tissue clearing, enabling detailed imaging without thin sectioning.

Assessing T-cell Receptor-Induced Calcium Influx Using a Calcium Indicator Dye

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2025

This video analyzes T-cell receptor-induced calcium influx in T-cells. Anti-CD3 antibodies activate the T-cell signaling pathways, leading to an increase in intracellular calcium ions that bind with Indo-1 dye. In flow cytometry, a spectrum shift from the calcium-free state to the calcium-bound state correlates with T-cell receptor-induced calcium influx.

Preparation of Mouse Brain Tissue for Immunoelectron Microscopy

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Cited by 52 •

2010

We describe a protocol for transcardiac perfusion of mice, removal and sectioning of the brain, as well as immunoperoxidase staining, resin embedding, and ultrathin sectioning of the brain sections. Upon completion of these procedures, the immunostained material is ready for examination with transmission electron microscopy.

A Chromatin Assay for Human Brain Tissue

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Cited by 16 •

2008

Until recently, expression studies on human brain were limited to quantification of RNA or protein. With the chromatin immunoprecipitation techniques described in this paper, it will be possible to map histone methylation and other epigenetic regulators of gene expression in postmortem brain.

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