Refractive Index Tomography

Refractive index tomography is a label-free three-dimensional imaging technique that maps how refractive index varies within a specimen, providing quantitative structural information for bioengineering and biomedical research. It works by illuminating a sample from multiple angles, recording transmitted optical fields or phase changes, and computationally reconstructing a volumetric refractive-index map through inverse scattering or diffraction-based methods. Because refractive index reflects differences in cellular composition and density, the technique can visualize living cells, subcellular organization, and tissue microstructure without fluorescent labels. These measurements support cell characterization, disease studies, biomaterials research, and quantitative monitoring of biological systems over time.

Refractive Index Tomography - Related Videos

Education

JoVE Science Education - Physics

Reflection and Refraction

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2023

Source: Derek Wilson, Asantha Cooray, PhD, Department of Physics & Astronomy, School of Physical Sciences, University of California, Irvine, CA Light travels at different speeds depending on the material through which it is propagating. When light travels from one material to another, it will either slow down or speed up. In order to conserve energy and momentum, the light must change the direction in which it propagates. This bending of light is known as refraction. Some fraction of the...

Research

JoVE EoE - Neuroimaging

In Vivo Imaging of the Mouse Retina Using Optical Coherence Tomography

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2025

Source: Jagodzinska, J., et. al., Optical Coherence Tomography: Imaging Mouse Retinal Ganglion Cells In Vivo. J. Vis. Exp. (2017) In this video, we demonstrate the use of spectral-domain optical coherence tomography (SD-OCT) to image retinal layers and assess structural changes in a genetically modified mouse model with optic neuropathy.

Fabrication of Refractive-index-matched Devices for Biomedical Microfluidics

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Cited by 6 •

2018

This protocol describes the fabrication of microfluidic devices from MY133-V2000 to eliminate artifacts that often arise in microchannels due to the mismatching refractive indices between microchannel structures and an aqueous solution. This protocol uses an acrylic holder to compress the encapsulated device, improving adhesion both chemically and mechanically.

Subjective Refraction Test Using a Smartphone for Vision Screening

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Cited by 1 •

2024

This paper presents the protocols and clinical validation data for using a smartphone app to subjectively measure refractive error.

Research

JoVE Journal - Medicine
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Computed Tomography-guided Time-domain Diffuse Fluorescence Tomography in Small Animals for Localization of Cancer Biomarkers

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Cited by 18 •

2012

Diffuse fluorescence tomography offers a relatively low-cost and potentially high-throughout approach to preclinical in vivo tumor imaging. The methodology of optical data collection, calibration, and image reconstruction is presented for a computed tomography-guided non-contact time-domain system using fluorescent targeting of the tumor biomarker epidermal growth factor receptor in a mouse glioma model.

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