Polyacrylamide Substrates

Polyacrylamide substrates are tunable synthetic materials used to culture cells on surfaces with defined mechanical properties, making them important tools for studying how physical cues regulate biology. Their stiffness is controlled during polymerization by adjusting the concentrations of acrylamide and the cross-linker bis-acrylamide, while surface functionalization with extracellular matrix proteins supports cell attachment. In biological research, these substrates help isolate the effects of matrix stiffness on cell spreading, migration, differentiation, adhesion, and cytoskeletal organization. By providing reproducible mechanical environments, they support mechanobiology studies and improve understanding of how cells sense and respond to their surrounding tissue matrix.

Polyacrylamide Substrates - Related Videos

Research

JoVE Journal - Biology

Generation of Polyacrylamide and Silicone Extracellular Matrix Substrates with Defined Stiffness for Cell Biology Applications

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2026

Although extracellular matrix (ECM) stiffness is a key regulator of cellular behavior, the underlying sensing and transduction mechanisms remain unclear. To address this, we provide protocols for creating polyacrylamide- and silicone-based substrates with tunable stiffness to advance our understanding of cell-ECM crosstalk.

Fluorescent Peptide Zymography: A Modified Technique to Detect Protease Activity Using Fluorogenic Substrates in Zymogram Gels

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2025

In this video, we perform zymography, an electrophoretic technique, to analyze the proteolytic activity within biological samples.

Fluorescent Silver Staining: A Technique to Visualize Total Protein in Polyacrylamide Gels

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2025

In this video, we demonstrate a silver staining method of polyacrylamide gels for the visualization of total protein by using fluorogenic probes.

Preparation of DNA-crosslinked Polyacrylamide Hydrogels

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Cited by 5 •

2014

Our laboratory has developed DNA-crosslinked polyacrylamide hydrogels, a dynamic hydrogel system, to better understand the effects of modulating tissue stiffness on cell function. Here, we provide schematics, descriptions, and protocols to prepare these hydrogels.

Characterization of Multi-subunit Protein Complexes of Human MxA Using Non-denaturing Polyacrylamide Gel-electrophoresis

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Cited by 3 •

2016

This article describes a simple and rapid protocol to evaluate the oligomeric state of the dynamin-like GTPase MxA protein from lysates of human cells using a combination of non-denaturing PAGE with western blot analysis.

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