Proteolytic Activity

Proteolytic activity is the biochemical process by which proteases break peptide bonds in proteins, regulating protein abundance, structure, and function across cells and tissues. Proteases act through catalytic residues that hydrolyze peptide bonds, while zymogen activation, endogenous inhibitors, substrate availability, and compartmentalization help control when and where cleavage occurs. In neuroscience, this activity influences synaptic remodeling, extracellular-matrix turnover, axonal growth, and inflammatory signaling. Measuring proteolytic activity can therefore help characterize neuronal development and identify dysregulated protein degradation associated with neurodegenerative disease, supporting studies of therapeutic targets and disease mechanisms.

Proteolytic Activity - Related Videos

Research

JoVE EoE - Immunodiagnostics

A Fluorogenic Peptide Cleavage Assay to Screen the Proteolytic Activity of Proteases

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2025

This video demonstrates an assay to screen for the proteolytic activity of proteases using fluorogenic peptides. The protease recognizes its cleavage site on the peptide, cleaving it and separating the quencher from the fluorophore, enabling its fluorescence emission. The fluorescence signal is detected and analyzed to check for the cleavage efficiency of different peptide variants.

A Colorimetric Assay that Specifically Measures Granzyme B Proteolytic Activity: Hydrolysis of Boc-Ala-Ala-Asp-S-Bzl

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Cited by 12 •

2014

We describe a simple, quantitative colorimetric assay that specifically measures the proteolytic activity of human, mouse or rat Granzyme B (GzmB). This protocol can be easily adapted for determining protease activity of other granule serine proteases by the hydrolysis of other synthetic peptide substrates with an appropriate recognition sequence.

Research

JoVE Journal - Biochemistry
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A Fluorogenic Peptide Cleavage Assay to Screen for Proteolytic Activity: Applications for coronavirus spike protein activation

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Cited by 24 •

2019

We present a fluorogenic peptide cleavage assay that allows a rapid screening of the proteolytic activity of proteases on peptides representing the cleavage site of viral fusion peptides. This method can also be used on any other amino acid motif within a protein sequence to test for the protease activity.

Research

JoVE Journal - Biology
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Demonstration of Proteolytic Activation of the Epithelial Sodium Channel (ENaC) by Combining Current Measurements with Detection of Cleavage Fragments

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Cited by 4 •

2014

Proteolytic activation of the epithelial sodium channel (ENaC) heterologously expressed in Xenopus laevis oocytes can be demonstrated by combining current measurements with a biotinylation approach to investigate the appearance of ion channel cleavage products at the cell surface. Functionally important cleavage sites can be identified by using site-directed mutagenesis.

Proteolytically Degraded Alginate Hydrogels and Hydrophobic Microbioreactors for Porcine Oocyte Encapsulation

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Cited by 10 •

2020

Presented here are two protocols for the encapsulation of porcine oocytes in 3D culture conditions. In the first, cumulus-oocyte complexes (COCs) are encapsulated in fibrin-alginate beads. In the second, they are enclosed with fluorinated ethylene propylene powder particles (microbioreactors). Both systems ensure optimal conditions to maintain their 3D organization.

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