Substrate Inoculation

Substrate inoculation is the deliberate introduction of microorganisms, cells, or biological agents into a material that provides nutrients, physical support, or both. In bioengineering, an inoculum is distributed through or onto the substrate under controlled conditions so the introduced organisms can attach, grow, and transform available compounds through metabolism. This process initiates biological production and enables the development of engineered cultures, biofilms, and other biological systems. Applications include bioprocessing, biomaterial fabrication, environmental treatment, and research on microbial growth, where inoculation conditions influence colonization, product yield, system stability, and reproducibility.

Substrate Inoculation - Related Videos

Research

JoVE Journal - Medicine
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In vivo Dual Substrate Bioluminescent Imaging

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Cited by 20 •

2011

Herein we describe the methods to construct, visualize, and quantify the bioluminescent reactions of both firefly and renilla luciferase enzymes expressed in metastatic breast cancer cells during their growth and metastasis in vivo.

Research

JoVE Journal - Immunology and Infection

Intratracheal Inoculation of Fischer 344 Rats with Francisella tularensis

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Cited by 2 •

2017

This protocol describes intratracheal inoculations of Fischer 344 rats with Francisella tularensis. This procedure mimics pulmonary exposure of humans to this potential biothreat agent and can be used to test vaccine and therapeutic efficacy against pulmonary tularemia.

Defining Substrate Specificities for Lipase and Phospholipase Candidates

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Cited by 10 •

2016

Many predicted (phospho)lipases are poorly characterized with regard to their substrate specificities and physiological functions. Here we provide a protocol to optimize enzyme activities, search for natural substrates, and propose physiological functions for these enzymes.

Inoculating a Bacterial Pathogen into Arabidopsis Leaves via Vacuum Infiltration

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2026

Source: Rufián, J. S., et.al. Single-Cell Analysis of the Expression of Pseudomonas syringae Genes within the Plant Tissue. J. Vis. Exp. (2022)This video demonstrates a vacuum infiltration method to introduce a bacterial pathogen into Arabidopsis plant leaves. The approach uses a prepared bacterial suspension and vacuum pulses to enable uniform entry through stomata, resulting in controlled leaf infection.

Identification of Kinase-substrate Pairs Using High Throughput Screening

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Cited by 1 •

2015

Protein phosphorylation is a central feature of how cells interpret and respond to information in their extracellular milieu. Here, we present a high throughput screening protocol using kinases purified from mammalian cells to rapidly identify kinases that phosphorylate a substrate(s) of interest.

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