Mucosal DCs are a rare cell population strongly influenced by the tissue environment, which changes their phenotype and function once they enter the tissues3. While blood derived DCs are a very useful model, they do not fully represent the diversity of DC populations found in tissues. Therefore, to understand the unique characteristics of mucosal DCs, isolation of primary cells from tissues is necessary. Isolation of DCs from different anatomical sites in the FRT offers the opportunity to study DC function in vitro and compare between DC subsets and anatomical locations.
Here we provide a protocol that allows the purification of DCs from human FRT tissues for in vitro assessment of functional characteristics. Since DCs are found at mucosal sites in low numbers, we developed a protocol to enrich the tissue cell preparation by density gradient centrifugation and dead cell removal prior to cell isolation with magnetic beads. Proper removal of dead cells is key, as they will interfere with bead isolation. This technique provides high purity of positively isolated cells (≈ 90%), in a relatively short amount of time (4-6 h), and without the need for overnight incubation, in vitro cell culture, or migration prior to isolation, each of which can activate DCs and alter their phenotypic characteristics. Our protocol does not trigger cell activation, as measured by the lack of up-regulation of maturation markers (CD86, HLA-DR, CD83)13. Another advantage is the use of a non-proteolytic enzymatic digestion, which does not cleave surface markers and allows for immediate cell isolation or phenotypical analysis following tissue digestion14.
Critical to this protocol is the generation of a single cell suspension to avoid the blockage of the magnetic columns. To ensure this, dead cells must be removed prior to the magnetic cell selection, filters need to be used on top of the magnetic columns, and tissues larger than 3 g should be divided between two columns. The use of a second column after the first round of purification is key to high cell purity.
One limitation of the isolation method is the inherent low number of DCs in FRT tissues, which usually does not allow for good cell recovery of tissues smaller than 1 g. Under these circumstances, however, phenotypical analyses can still be performed using the enriched mixed cell suspension. This is possible due to the non-proteolytic digestion method used, which does not cleave surface markers and allows for immediate analysis of cell phenotype after tissue digestion14. Additionally, the patient age can be a factor that influences the number of cells recovered.
Using this protocol, we have previously demonstrated that CD1a+ isolation provides a phenotypically more homogeneous population than CD14+ selection13; however, CD1a+ DCs are difficult to recover from CX and ECX. While CD14 can also be expressed on macrophages, we found that the FRT CD14+ isolated population is rich in DCs, based on co-expression of DC markers and their ability to stimulate allogeneic naïve T-cells, which is a hallmark function of DCs13.
Since the number of DCs recovered is generally low (< 100,000 total cells), functional studies need to be optimized for low cell numbers. Here we show the optimization of an allogeneic stimulation assay, which can be performed with only 3,000 DCs/well. We have carried out other function studies with these cells, including hormonal responsiveness, cytokine, and antimicrobial peptide production upon HIV-stimulation and HIV-capture by FRT DCs13. Once the DCs are isolated and plated, assays should be performed within 24 h, as cell viability decreases after that time.
This protocol can be adapted to isolate different DC subsets, or other cell types by selecting the proper markers coupled to the magnetic beads and combining sequential positive and negative bead selection to remove unwanted cell types. One caution, though, is that with every round of selection some percentage of cells will be lost, so for the isolation of FRT DCs, which are already rare, and the tissue size is generally small, multiple rounds of selection with different markers (and the necessary washes associated) are not desirable. Moreover, this protocol can be adapted to isolate other immune cells or DCs from other tissues14,15.