Coronal Section Analysis

Coronal section analysis is the examination of anatomical or biological structures in slices made through the coronal plane, which divides a specimen into anterior and posterior portions. Researchers create or visualize these sections and assess the arrangement, size, boundaries, and relationships of tissues or organs across one or more planes, often using microscopy or medical imaging. In biology, this approach supports anatomical mapping, neuroanatomical studies, developmental research, and the identification of structural changes associated with disease or experimental treatment. Comparing coronal sections across specimens or time points can reveal spatial patterns that are difficult to interpret from intact samples alone.

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JoVE EoE - Neuropathology

Treatment of Rat Coronal Slices with a Neurotoxic Peptide

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2025

This video demonstrates the procedure to prepare and treat rat brain hemislices with a neurotoxic peptide to mimic neurodegeneration. The protocol allows for analyzing neurodegenerative events by directly comparing control and treated slices in the same anatomical plane.

Generating a Coronal Brain Slice Exposing the Amygdala Regions from a Mouse Brain

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2025

This video demonstrates the preparation of thin coronal brain slices from a murine brain, exposing the amygdala regions rich in synaptic connections from the medial prefrontal cortex. The slices are then recovered in oxygenated artificial cerebrospinal fluid to maintain neuronal viability.

Immunohistochemical Staining of Rat Coronal Tissue Cryosections for Microglia and Neurons

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2025

Source: Evilsizor, M. N., et. al., Primer for Immunohistochemistry on Cryosectioned Rat Brain Tissue: Example Staining for Microglia and Neurons. J. Vis. Exp. (2015)This video demonstrates a step-by-step immunohistochemistry staining procedure on cryosectioned rat brain tissue to visualize the spatial arrangement of microglia and neurons.

Measurement of Evoked Potassium Ion Concentration Dynamics in Coronal Hippocampal Slices

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2025

The video demonstrates evoked potassium ion concentration dynamics on electrical stimulation of mouse coronal hippocampal brain slices. A bipolar stimulating electrode is inserted into the stratum radiatum of the CA3 region in the hippocampus, and a potassium-ion selective electrode is placed in the CA1 stratum radiatum. The electrical stimulation causes an action potential, resulting in potassium ion release. Finally, the lack of evoked potassium ion response in the presence of an inhibitory...

Dissection and Coronal Slice Preparation of Developing Mouse Pituitary Gland

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Cited by 7 •

2017

We present a protocol to dissect pituitary glands and prepare pituitary coronal sections from developing mice.

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