Microbial Tracking

Microbial tracking is the monitoring of microorganisms, their abundance, distribution, and movement across environments, providing evidence of how microbial communities respond to changing conditions. Researchers collect samples from water, soil, air, or surfaces and identify or quantify microbes using culture-based assays, microscopy, molecular markers, quantitative PCR, or DNA sequencing. Comparing measurements across locations and time can reveal contamination pathways, shifts in community composition, and relationships between microbes and environmental factors such as nutrients, temperature, or pollution. In environmental research, microbial tracking supports pathogen surveillance, ecosystem assessment, wastewater management, and evaluation of remediation strategies.

Microbial Tracking - Related Videos

Research

JoVE Journal - Immunology and Infection

Cost-effective Method for Microbial Source Tracking Using Specific Human and Animal Viruses

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Cited by 23 •

2011

The study describes a cost-effective method for the identification of the source of fecal/urine contamination or contamination by nitrates in water using qPCR for the specific quantification of human/porcine/bovine DNA viruses, adenoviruses and polyomaviruses, proposed as MST tools.

Assembly and Tracking of Microbial Community Development within a Microwell Array Platform

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Cited by 12 •

2017

The development of microbial communities depends on a combination of factors, including environmental architecture, member abundance, traits, and interactions. This protocol describes a synthetic, microfabricated environment for the simultaneous tracking of thousands of communities contained in femtoliter wells, where key factors such as niche size and confinement can be approximated.

Tracking Microbial Contamination in Retail Environments Using Fluorescent Powder - A Retail Delicatessen Environment Example

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Cited by 11 •

2014

The overall goal of this study was to demonstrate the potential cross contamination mechanism of foodborne pathogen Listeria monocytogenes in a retail deli setting. This methodology may be applied to a variety of different environments to track pathogen contamination.

Investigating the Microbial Community in the Termite Hindgut - Interview

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2007

Jared Leadbetter explains why the termite-gut microbial community is an excellent system for studying the complex interactions between microbes. The symbiotic relationship existing between the host insect and lignocellulose-degrading gut microbes is explained, as well as the industrial uses of these microbes for degrading plant biomass and generating biofuels.

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