Tissue-specific Sampling

Tissue-specific sampling is the collection of biological material from a defined tissue or cell population for genetic analysis, allowing researchers to detect molecular features that may be missed in mixed or inappropriate samples. The process involves selecting a representative tissue, collecting and preserving it under conditions that maintain DNA or RNA integrity, and applying methods such as nucleic acid extraction, sequencing, or targeted assays. In genetics, this approach helps evaluate tissue-restricted gene expression, genetic mosaicism, and disease-associated changes that vary across organs. Careful sampling improves data interpretation and supports research into development, disease mechanisms, inherited conditions, and personalized diagnostics.

Tissue-specific Sampling - Related Videos

Research

JoVE EoE - Staining Techniques

Eosin Staining of Soft-Tissue Samples: An Eosin-Based Procedure for Whole Mouse Kidney Staining to Visualize Specific Tissue Microstructures

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2025

This video demonstrates the procedure for the acidification of the whole mouse kidney with fixation followed by Eosin Y staining. This cytoplasm-specific Eosin staining method helps visualize and identify anatomical structures in the tissue.

Quantitation of γH2AX Foci in Tissue Samples

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Cited by 7 •

2010

Quantitation of DNA double-strand breaks on the basis of γH2AX foci has become an invaluable tool, particularly in radiation biology, for the evaluation of tissue radiosensitivity and effects of radiation modifying compounds. Here we demonstrate the use of an immunofluorescence assay for quantitation of γH2AX foci in tissue samples.

A Hydrophobic Tissue Clearing Method for a Rat Brain Tissue Sample

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2025

Source: Kirchner, K.N., et al., A Hydrophobic Tissue Clearing Method for Rat Brain Tissue. J. Vis. Exp. (2020).This video demonstrates the method of hydrophobic tissue clearing of a rat brain tissue sample. The sample is sequentially dehydrated in methanol, treated with a dichloromethane and methanol mixture to dissolve lipids and pigments, and transferred to dibenzyl ether for complete tissue clearing, enabling detailed imaging without thin sectioning.

Isolate Cell-Type-Specific RNAs from Snap-Frozen Heterogeneous Tissue Samples without Cell Sorting

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2021

This protocol aims to isolate cell-type-specific translating ribosomal mRNAs using the NuTRAP mouse model.

Research

JoVE Journal - Bioengineering
Free Sample

3D Imaging of Soft-Tissue Samples using an X-ray Specific Staining Method and Nanoscopic Computed Tomography

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Cited by 3 •

2019

A protocol for 3D visualization of microscopic tissue structures by using an X-ray specific staining method designed for X-ray computed tomography is presented.

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