Arabidopsis Cotyledons

Arabidopsis cotyledons are the embryonic leaves of Arabidopsis thaliana, a widely used plant model, and they provide an accessible system for studying early plant development. After germination, cotyledons emerge from the seed, expand, and develop chloroplasts in response to light, enabling photosynthesis while the seedling establishes its first true leaves. Their visible growth and sensitivity to environmental and hormonal signals make them useful for investigating seedling establishment, photomorphogenesis, leaf development, and cellular differentiation. Research on Arabidopsis cotyledons also helps clarify how plants coordinate light perception, metabolism, and developmental transitions.

Arabidopsis Cotyledons - Related Videos

Research

JoVE Journal - Biology

Long-term, High-resolution Confocal Time Lapse Imaging of Arabidopsis Cotyledon Epidermis during Germination

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Cited by 26 •

2012

We describe a protocol using chamber slides and media to immobilize plant cotyledons for confocal imaging of the epidermis over several days of development, documenting stomatal differentiation. Fluorophore-tagged proteins can be tracked dynamically by expression and subcellular localization, increasing understanding of their possible roles during cell division and cell-type differentiation.

A Method for Characterizing Embryogenesis in Arabidopsis

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Cited by 11 •

2017

This protocol outlines a method for observing embryogenesis in Arabidopsis via ovule clearance followed by the inspection of embryo pattern formation under a microscope.

Lateral Root Inducible System in Arabidopsis and Maize

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Cited by 8 •

2016

The Lateral Root Inducible System (LRIS) allows for synchronous induction of lateral roots and is presented for Arabidopsis thaliana and maize.

Research

JoVE Journal - Biology
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Standardized Method for High-throughput Sterilization of Arabidopsis Seeds

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Cited by 143 •

2017

The objective of this study was to determine the effects of bleach and chlorine gas sterilization on seed germination of a range of Arabidopsis genotypes grown on sterile media. Optimized sterilization protocols have been developed to prevent the growth of microbial contaminants while providing satisfactory seed survival.

Inoculating a Bacterial Pathogen into Arabidopsis Leaves via Vacuum Infiltration

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2026

Source: Rufián, J. S., et.al. Single-Cell Analysis of the Expression of Pseudomonas syringae Genes within the Plant Tissue. J. Vis. Exp. (2022)This video demonstrates a vacuum infiltration method to introduce a bacterial pathogen into Arabidopsis plant leaves. The approach uses a prepared bacterial suspension and vacuum pulses to enable uniform entry through stomata, resulting in controlled leaf infection.

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