Single Cell Visualization

Single-cell visualization is the imaging and analysis of individual cells to reveal their morphology, behavior, molecular features, and interactions within tissues or cultures. Researchers use light, fluorescence, confocal, or advanced microscopy to label cellular structures or molecules, capture images over time, and resolve signals from one cell rather than relying only on population averages. In biology, these approaches expose cellular heterogeneity, track processes such as division, migration, and differentiation, and connect molecular activity with cell function. They support disease research, developmental studies, and therapeutic evaluation by showing how distinct cells respond to their environment or treatment.

Single Cell Visualization - Related Videos

Research

JoVE EoE - Bacterial Growth and Techniques

Visualization of Single-Cell Bacterial Interactions

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2025

Source: Yarringto, K. D., et al. Kinetic Visualization of Single-Cell Interspecies Bacterial Interactions. J. Vis. Exp. (2020)This video demonstrates the preparation of a coculture system using motile and non-motile bacteria under an agarose pad for live-cell imaging. It shows how motile bacteria detect chemical attractants and invade non-motile colonies, revealing bacterial interactions.

Kinetic Visualization of Single-Cell Interspecies Bacterial Interactions

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Cited by 3 •

2020

This live-bacterial cell imaging protocol allows for visualization of interactions between multiple bacterial species at the single-cell level over time. Time-lapse imaging allows for observation of each bacterial species in monoculture or coculture to interrogate interspecies interactions in multispecies bacterial communities, including individual cell motility and viability.

Research

JoVE Journal - Immunology and Infection
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Visualizing Protein-DNA Interactions in Live Bacterial Cells Using Photoactivated Single-molecule Tracking

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Cited by 38 •

2014

Photoactivated localization microscopy (PALM) combined with single-molecule tracking allows direct observation and quantification of protein-DNA interactions in live Escherichia coli cells.

Research

JoVE Journal - Biology
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Visualizing Cytoplasmic Flow During Single-cell Wound Healing in Stentor coeruleus

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Cited by 15 •

2013

The giant ciliate Stentor coeruleus is a classical system for studying regeneration and wound healing in single cells. By imaging Stentor cells simultaneously at low and high magnification it is possible to measure cytoplasmic flows before, during, and after wounding.

CUBIC Protocol Visualizes Protein Expression at Single Cell Resolution in Whole Mount Skin Preparations

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Cited by 9 •

2016

This report describes a CUBIC protocol to clarify full thickness mouse skin biopsies, and visualize protein expression patterns, proliferating cells, and sebocytes at the single cell resolution in 3D. This method enables accurate assessment of skin anatomy and pathology, and of abnormal epidermal phenotypes in genetically modified mouse lines.

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