Brain Tissue Isolation

Brain tissue isolation is the process of separating brain tissue from surrounding structures while preserving its cellular and molecular properties for laboratory study. The procedure typically involves carefully removing the brain, dissecting specific regions, and using mechanical or enzymatic dissociation under controlled conditions to produce intact tissue sections, cell suspensions, or primary neural cultures. In neuroscience, isolated tissue supports analyses of neuronal and glial structure, gene expression, electrophysiology, and tissue responses to injury or treatment. It also provides essential material for studying brain development, neurodegenerative disease, synaptic function, and the effects of pharmacological or genetic interventions.

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JoVE EoE - Neuropathology

Isolation of Amyloid Fibrils from Brain Tissue Extract

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2025

This video demonstrates the protocol for isolating amyloid fibrils from mouse brain tissue extract using density gradient centrifugation and digestion of non-amyloid proteins.

Neuronal Nuclei Isolation from Human Postmortem Brain Tissue

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Cited by 136 •

2008

The cellular heterogeneity of brain tissue poses a significant limitation for the study of epigenetic markings in chromatin because most assays lack single cell resolution. Neurons typically are intermingled with glia and other non-neuronal cells. We provide a protocol to extract and collect neuronal nuclei from human brain.

Isolation of Cerebral Capillaries from Human Brain: An Optimized Method to Extract Cerebral Capillaries from Human Brain Tissue

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2025

This video presents the isolation of cerebral capillaries from a fresh human brain tissue. The isolated capillaries can then be used to generate an ex vivo blood brain barrier model.

Isolating Cell Populations from Brain Tissue Using Fluorescence-Activated Nuclei Sorting

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2025

This video demonstrates the procedure for isolating and sorting nuclei from fresh-frozen human brain tissue using fluorescence-activated nuclei sorting (FANS), which enables the study of different cell populations for various neurological applications.

Isolating Immune Cells from Mouse Brain and Skull

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Cited by 1 •

2024

To investigate the immune response to brain disorders, one common approach is to analyze changes in immune cells. Here, two simple and effective protocols are provided for isolating immune cells from murine brain tissue and skull bone marrow.

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