Granular Biofilms

Granular biofilms are compact, spherical aggregates of microorganisms embedded in a self-produced extracellular polymeric substance (EPS) matrix, forming dense communities that support efficient environmental processing. Within each granule, limited diffusion creates chemical gradients, allowing aerobic, anoxic, and anaerobic microbial zones to develop alongside one another; microorganisms then transform substrates such as organic matter, nitrogen, and other pollutants through coordinated metabolism. In environmental biotechnology, granular biofilms are central to aerobic granular sludge and related wastewater-treatment systems, where their strong settling properties, layered microbial activity, and resistance to fluctuating conditions can improve reactor performance while reducing space and energy demands. Understanding granule formation and stability informs treatment design and ecological engineering.

Granular Biofilms - Related Videos

Research

JoVE Journal - Environment
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Extraction of Structural Extracellular Polymeric Substances from Aerobic Granular Sludge

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Cited by 201 •

2016

The protocol provides a methodology to solubilize aerobic granular sludge in order to extract alginate-like extracellular polymers (ALE).

Research

JoVE EoE - Neuronal Culture Techniques

Isolating and Culturing Murine Cerebellar Granular Neuron Progenitors

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2025

This video demonstrates the isolation and cultivation of cerebellar neural progenitor cells from a mouse pup's cerebellum. Cerebellar granule neuron progenitors are isolated and purified through differential adhesion, effectively removing astrocytes. These cultured progenitors subsequently differentiate into cerebellar granule neurons.

Growth of Mycobacterium tuberculosis Biofilms

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Cited by 79 •

2012

Mycobacterium tuberculosis forms drug tolerant biofilms when cultured in certain conditions. Here we describe methods for culturing M. tuberculosis biofilms and determining the frequency of drug tolerant persisters. These protocols will be useful for further studies into the mechanisms of drug tolerance in M. tuberculosis.

Methodologies for Studying B. subtilis Biofilms as a Model for Characterizing Small Molecule Biofilm Inhibitors

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Cited by 28 •

2016

This study presents the development of reproducible methodologies to study biofilm inhibitors and their effects on Bacillus subtilis multicellularity.

Microtiter Dish Biofilm Formation Assay

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Cited by 2243 •

2011

The assay describes a rapid means to measure early biofilm formation in bacteria and fungi. This method uses a microtiter plate as the substratum for microbial biofilm formation, and the biofilm is visualized using crystal violet strain. The assay provides either a qualitative or quantitative assay for early biofilm formation.

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