Rat Brain Nuclei

Rat brain nuclei are anatomically distinct clusters of neuronal cell bodies that organize sensory, motor, autonomic, and cognitive functions, making them essential landmarks in neuroscience research. Each nucleus coordinates activity through defined patterns of neuronal connectivity, neurotransmitter signaling, and communication with other brain regions. Researchers identify and study these structures using histological staining, microscopy, tract tracing, electrophysiology, and stereotaxic methods to link neural circuits with behavior and physiology. Mapping rat brain nuclei supports investigations of learning, movement, stress, and disease mechanisms while providing anatomical reference points for experimental manipulation and comparison across mammalian brains.

Rat Brain Nuclei - Related Videos

Research

JoVE EoE - Neuropathology

Isolation of Oxytocin Receptor-Rich Nuclei from a Neonatal Rat Brain

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2025

This video demonstrates the isolation of oxytocin receptor-rich nuclei from the neonatal rat brain. Coronal slicing, followed by identification and precise punching of oxytocin receptor-rich brain nuclei, enables the effective extraction of oxytocin receptor-rich nuclei for further analysis.

Neuronal Nuclei Isolation from Human Postmortem Brain Tissue

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Cited by 136 •

2008

The cellular heterogeneity of brain tissue poses a significant limitation for the study of epigenetic markings in chromatin because most assays lack single cell resolution. Neurons typically are intermingled with glia and other non-neuronal cells. We provide a protocol to extract and collect neuronal nuclei from human brain.

Isolating Cell Populations from Brain Tissue Using Fluorescence-Activated Nuclei Sorting

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2025

This video demonstrates the procedure for isolating and sorting nuclei from fresh-frozen human brain tissue using fluorescence-activated nuclei sorting (FANS), which enables the study of different cell populations for various neurological applications.

Research

JoVE Journal - Biology
Free Sample

High-Quality Brain and Bone Marrow Nuclei Preparation for Single Nuclei Multiome Assays

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Cited by 1 •

2023

The success of single-cell/single-nuclei transcriptomics and multi-omics largely depends on the quality of cells/nuclei. Therefore, isolating cells/nuclei from tissue and their purification must be highly standardized. This protocol describes the preparation of nuclei from the brain and bone marrow for downstream single-nuclei multiome assay.

Stereotaxic Surgery for Excitotoxic Lesion of Specific Brain Areas in the Adult Rat

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Cited by 22 •

2012

Targeted ablation of specific brain region(s) by infusion of an excitotoxin using stereotaxic coordinates is described. This technique could also be adapted for infusion of other chemicals into the rat brain.

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