Macrophage Phenotyping

Macrophage phenotyping is the identification and characterization of macrophage populations based on their surface markers, intracellular proteins, gene expression, and functional properties. In immunology and infection research, phenotyping typically combines flow cytometry, immunostaining, or transcriptomic analysis to measure how signals such as microbial products and cytokines alter macrophage activation, polarization, metabolism, and effector functions. These analyses can distinguish tissue-resident and recruited macrophages, assess inflammatory and antimicrobial responses, and reveal changes during infection or disease. Macrophage phenotyping supports studies of host-pathogen interactions, immune regulation, vaccine responses, and therapeutic development while providing a framework for linking cellular states to infection outcomes.

Macrophage Phenotyping - Related Videos

Research

JoVE Journal - Immunology and Infection

Phenotypic Characterization of Macrophages from Rat Kidney by Flow Cytometry

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Cited by 37 •

2016

This manuscript describes a detailed protocol for phenotypic and quantitative analysis of resident macrophages from rat kidneys by flow cytometry. The resulting stained cells can be also used for other applications, including cell sorting, gene expression analysis or functional studies, thus increasing the information obtained in the experimental model.

Depletion and Reconstitution of Macrophages in Mice

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Cited by 118 •

2012

Macrophages play a central role in homeostasis and pathology in many tissues. The protocol presented here describes methods for depleting macrophages in vivo, deriving polarized macrophages from bone marrow aspirates, and adoptively transferring macrophages into mice. These techniques allow determination of the role that polarized macrophages play in health and disease.

In Vitro Culture and Differentiation of Primary Monocytes into Macrophages

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2025

This video demonstrates the priming of primary monocytes into macrophages. Primary human monocytes can be isolated and differentiated to an M1-like pro-inflammatory phenotype using the granulocyte-macrophage colony-stimulating factor (GM-CSF) or to an M2-like anti-inflammatory phenotype using the macrophage colony-stimulating factor (M-CSF).

Investigation of Macrophage Polarization Using Bone Marrow Derived Macrophages

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Cited by 326 •

2013

The article describes a readily easy adaptive in vitro model to investigate macrophage polarization. In the presence of GM-CSF/M-CSF, hematopoietic stem/progenitor cells from the bone marrow are directed into monocytic differentiation, followed by M1 or M2 stimulation. The activation status can be tracked by changes in cell surface antigens, gene expression and cell signaling pathways.

Isolation, Characterization, and Purification of Macrophages from Tissues Affected by Obesity-related Inflammation

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Cited by 15 •

2017

This protocol allows a researcher to isolate and characterize tissue-resident macrophages in various hallmark inflamed tissues extracted from diet-induced models of metabolic disorders.

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