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Journal / Genetics / En bioinformatik pipeline för att noggrant och…
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Genetics

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JoVE Journal Genetics
En bioinformatik pipeline för att noggrant och effektivt analysera MicroRNA Transcriptomes i växter
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En bioinformatik pipeline för att noggrant och effektivt analysera MicroRNA Transcriptomes i växter

Article DOI: 10.3791/59864-v • 06:34 min • January 21st, 2020
January 21st, 2020 •
*1,2, *1,2, 2, 1
1Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, 2State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University
* These authors contributed equally

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En bioinformatik rörledning, nämligen mirdeep-P2 (miRDP2 för kort), med uppdaterade växt Mirna kriterier och en översyn algoritm, kan exakt och effektivt analysera MicroRNA transkriptom i växter, särskilt för arter med komplexa och stora genom.

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Genetik utfärda 155 microRNA (miRNA) växt sRNA-SEQ miRDeep-P2 (miRDP2) nästa generations sekvensering växt miRNA kriterier miRDeep-P (miRDP)
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