Pavel Tomancak Max Planck Institute of Molecular Cell Biology and Genetics Biography Publications Institution JoVE Articles Pavel Tomancak has not added a biography. If you are Pavel Tomancak and would like to personalize this page please email our Author Liaison for assistance. Publications Publisher Correction: Attachment of the Blastoderm to the Vitelline Envelope Affects Gastrulation of Insects Nature. Apr, 2019 | Pubmed ID: 30971828 Attachment of the Blastoderm to the Vitelline Envelope Affects Gastrulation of Insects Nature. Apr, 2019 | Pubmed ID: 30918398 Control of Hox Transcription Factor Concentration and Cell-to-cell Variability by an Auto-regulatory Switch Development (Cambridge, England). Jan, 2019 | Pubmed ID: 30642837 Comment on "Cortical Folding Scales Universally with Surface Area and Thickness, Not Number of Neurons" Science (New York, N.Y.). Feb, 2016 | Pubmed ID: 26912886 A Genome-wide Resource for the Analysis of Protein Localisation in Drosophila ELife. 2016 | Pubmed ID: 26896675 A Role for Tuned Levels of Nucleosome Remodeler Subunit ACF1 During Drosophila Oogenesis Developmental Biology. Mar, 2016 | Pubmed ID: 26851213 An Automated Workflow for Parallel Processing of Large Multiview SPIM Recordings Bioinformatics (Oxford, England). Dec, 2015 | Pubmed ID: 26628585 Probing the Kinetic Landscape of Hox Transcription Factor-DNA Binding in Live Cells by Massively Parallel Fluorescence Correlation Spectroscopy Mechanisms of Development. Nov, 2015 | Pubmed ID: 26428533 BigDataViewer: Visualization and Processing for Large Image Data Sets Nature Methods. Jun, 2015 | Pubmed ID: 26020499 Endogenously Tagged Rab Proteins: a Resource to Study Membrane Trafficking in Drosophila Developmental Cell. May, 2015 | Pubmed ID: 25942626 Systematic Imaging Reveals Features and Changing Localization of MRNAs in Drosophila Development ELife. 2015 | Pubmed ID: 25838129 Guide to Light-sheet Microscopy for Adventurous Biologists Nature Methods. Jan, 2015 | Pubmed ID: 25549268 Introns and Gene Expression: Cellular Constraints, Transcriptional Regulation, and Evolutionary Consequences BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology. Feb, 2015 | Pubmed ID: 25400101 An Adaptive Threshold in Mammalian Neocortical Evolution PLoS Biology. Nov, 2014 | Pubmed ID: 25405475 Open-source Solutions for SPIMage Processing Methods in Cell Biology. 2014 | Pubmed ID: 24974045 Efficient Bayesian-based Multiview Deconvolution Nature Methods. Jun, 2014 | Pubmed ID: 24747812 Bioimage Informatics in the Context of Drosophila Research Methods (San Diego, Calif.). Jun, 2014 | Pubmed ID: 24732429 Going "open" with Mesoscopy: a New Dimension on Multi-view Imaging Protoplasma. Mar, 2014 | Pubmed ID: 24442669 The Earliest Transcribed Zygotic Genes Are Short, Newly Evolved, and Different Across Species Cell Reports. Jan, 2014 | Pubmed ID: 24440719 OpenSPIM: an Open-access Light-sheet Microscopy Platform Nature Methods. Jul, 2013 | Pubmed ID: 23749304 An Excess of Gene Expression Divergence on the X Chromosome in Drosophila Embryos: Implications for the Faster-X Hypothesis PLoS Genetics. 2012 | Pubmed ID: 23300473 ImgLib2--generic Image Processing in Java Bioinformatics (Oxford, England). Nov, 2012 | Pubmed ID: 22962343 Biological Imaging Software Tools Nature Methods. Jul, 2012 | Pubmed ID: 22743775 Fiji: an Open-source Platform for Biological-image Analysis Nature Methods. Jul, 2012 | Pubmed ID: 22743772 Current Challenges in Open-source Bioimage Informatics Nature Methods. Jul, 2012 | Pubmed ID: 22743770 TrakEM2 Software for Neural Circuit Reconstruction PloS One. 2012 | Pubmed ID: 22723842 Elastic Volume Reconstruction from Series of Ultra-thin Microscopy Sections Nature Methods. Jul, 2012 | Pubmed ID: 22688414 The Evolution of Early Animal Embryos: Conservation or Divergence? Trends in Ecology & Evolution. Jul, 2012 | Pubmed ID: 22520868 Abundant Occurrence of Basal Radial Glia in the Subventricular Zone of Embryonic Neocortex of a Lissencephalic Primate, the Common Marmoset Callithrix Jacchus Cerebral Cortex (New York, N.Y. : 1991). Feb, 2012 | Pubmed ID: 22114084 Recombination-mediated Genetic Engineering of Large Genomic DNA Transgenes Methods in Molecular Biology (Clifton, N.J.). 2011 | Pubmed ID: 22065454 Production of Fosmid Genomic Libraries Optimized for Liquid Culture Recombineering and Cross-species Transgenesis Methods in Molecular Biology (Clifton, N.J.). 2011 | Pubmed ID: 22065453 Restoration of Uneven Illumination in Light Sheet Microscopy Images Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. Aug, 2011 | Pubmed ID: 21682937 Linkcomm: an R Package for the Generation, Visualization, and Analysis of Link Communities in Networks of Arbitrary Size and Type Bioinformatics (Oxford, England). Jul, 2011 | Pubmed ID: 21596792 Gene Expression Divergence Recapitulates the Developmental Hourglass Model Nature. Dec, 2010 | Pubmed ID: 21150996 An Integrated Micro- and Macroarchitectural Analysis of the Drosophila Brain by Computer-assisted Serial Section Electron Microscopy PLoS Biology. 2010 | Pubmed ID: 20957184 Meeting Report: First Light Sheet Based Fluorescence Microscopy Workshop Biotechnology Journal. Aug, 2010 | Pubmed ID: 20652906 An Alignment-free Method to Identify Candidate Orthologous Enhancers in Multiple Drosophila Genomes Bioinformatics (Oxford, England). Sep, 2010 | Pubmed ID: 20624780 As-rigid-as-possible Mosaicking and Serial Section Registration of Large SsTEM Datasets Bioinformatics (Oxford, England). Jun, 2010 | Pubmed ID: 20529937 Software for Bead-based Registration of Selective Plane Illumination Microscopy Data Nature Methods. Jun, 2010 | Pubmed ID: 20508634 Mapping the Complexity of Transcription Control in Higher Eukaryotes Genome Biology. 2010 | Pubmed ID: 20441601 Visualization of Image Data from Cells to Organisms Nature Methods. Mar, 2010 | Pubmed ID: 20195255 In Vivo RNAi Rescue in Drosophila Melanogaster with Genomic Transgenes from Drosophila Pseudoobscura PloS One. 2010 | Pubmed ID: 20126626 Motif Composition, Conservation and Condition-specificity of Single and Alternative Transcription Start Sites in the Drosophila Genome Genome Biology. 2009 | Pubmed ID: 19589141 A Toolkit for High-throughput, Cross-species Gene Engineering in Drosophila Nature Methods. Jun, 2009 | Pubmed ID: 19465918 CATMAID: Collaborative Annotation Toolkit for Massive Amounts of Image Data Bioinformatics (Oxford, England). Aug, 2009 | Pubmed ID: 19376822 Globally Optimal Stitching of Tiled 3D Microscopic Image Acquisitions Bioinformatics (Oxford, England). Jun, 2009 | Pubmed ID: 19346324 Selective Maintenance of Drosophila Tandemly Arranged Duplicated Genes During Evolution Genome Biology. 2008 | Pubmed ID: 19087263 Mapping the Gene Expression Universe Current Opinion in Genetics & Development. Dec, 2008 | Pubmed ID: 18809490 Global Analysis of MRNA Localization Reveals a Prominent Role in Organizing Cellular Architecture and Function Cell. Oct, 2007 | Pubmed ID: 17923096 Transcriptional Control in Embryonic Drosophila Midline Guidance Assessed Through a Whole Genome Approach BMC Neuroscience. 2007 | Pubmed ID: 17672901 Global Analysis of Patterns of Gene Expression During Drosophila Embryogenesis Genome Biology. 2007 | Pubmed ID: 17645804 Drosophila MicroRNAs Exhibit Diverse Spatial Expression Patterns During Embryonic Development Proceedings of the National Academy of Sciences of the United States of America. Dec, 2005 | Pubmed ID: 16330759 Computational Identification of Drosophila MicroRNA Genes Genome Biology. 2003 | Pubmed ID: 12844358 Systematic Determination of Patterns of Gene Expression During Drosophila Embryogenesis Genome Biology. 2002 | Pubmed ID: 12537577 Exploiting Transcription Factor Binding Site Clustering to Identify Cis-regulatory Modules Involved in Pattern Formation in the Drosophila Genome Proceedings of the National Academy of Sciences of the United States of America. Jan, 2002 | Pubmed ID: 11805330 स्थानीय सेलुलर और ऊतक तराजू पर Actomyosin गतिशीलता का विश्लेषण संस्कृतिD Drosophila अंडे कक्षों के समय चूक सिनेमा का उपयोग Ivana Viktorinová1,2, Robert Haase*1,2, Tobias Pietzsch*1,2, Ian Henry1,2, Pavel Tomancak1,2 1Max Planck Institute of Molecular Cell Biology and Genetics, 2Center for Systems Biology Dresden JoVE 58587 발생학 छवि Zebrafish आँख विकास के लिए प्रकाश शीट प्रतिदीप्ति माइक्रोस्कोपी का उपयोग Jaroslav Icha*1, Christopher Schmied*1, Jaydeep Sidhaye1, Pavel Tomancak1, Stephan Preibisch1,2,3, Caren Norden1 1Max Planck Institute of Molecular Cell Biology and Genetics, 2HHMI Janelia Research Campus, 3Berlin Institute of Medical Systems Biology of the Max Delbrück Center 발생학
स्थानीय सेलुलर और ऊतक तराजू पर Actomyosin गतिशीलता का विश्लेषण संस्कृतिD Drosophila अंडे कक्षों के समय चूक सिनेमा का उपयोग Ivana Viktorinová1,2, Robert Haase*1,2, Tobias Pietzsch*1,2, Ian Henry1,2, Pavel Tomancak1,2 1Max Planck Institute of Molecular Cell Biology and Genetics, 2Center for Systems Biology Dresden JoVE 58587 발생학
छवि Zebrafish आँख विकास के लिए प्रकाश शीट प्रतिदीप्ति माइक्रोस्कोपी का उपयोग Jaroslav Icha*1, Christopher Schmied*1, Jaydeep Sidhaye1, Pavel Tomancak1, Stephan Preibisch1,2,3, Caren Norden1 1Max Planck Institute of Molecular Cell Biology and Genetics, 2HHMI Janelia Research Campus, 3Berlin Institute of Medical Systems Biology of the Max Delbrück Center 발생학
