Tube Formation Quantification

Tube formation quantification is an image-based method for measuring the organization of cells into interconnected tubular networks, commonly used to assess angiogenic behavior in biology. In a typical assay, endothelial cells are cultured on a matrix that promotes alignment and network formation, after which microscopy images are analyzed for features such as total tube length, number of junctions, network coverage, and enclosed meshes. These measurements convert visual patterns into quantitative data, enabling comparisons between treatments, cell types, or experimental conditions. The approach supports research on vascular development, disease mechanisms, drug screening, and compounds that promote or inhibit blood-vessel formation.

Tube Formation Quantification - Related Videos

Research

JoVE Journal - Biology

Endothelial Cell Tube Formation Assay for the In Vitro Study of Angiogenesis

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Cited by 345 •

2014

The tube formation assay is a fast, quantifiable method for measuring in vitro angiogenesis. Endothelial cells are combined with conditioned media and plated on basement membrane extract. Tube formation occurs within hours and newly formed tubules easily quantified.

A Matrigel-Based Tube Formation Assay to Assess the Vasculogenic Activity of Tumor Cells

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Cited by 121 •

2011

A tube formation assay is used to evaluate vascular activity of tumor cells.

Chip-in-a-Tube-Based Digital PCR for Quantification of Single Nucleotide Variants

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2025

This video demonstrates the utility of digital PCR in a chip-in-a-tube format for the detection of single nucleotide variations in DNA samples. A single PCR reaction is partitioned into chambers that act as independent PCR reactions, and the detection of fluorescence signals from the amplified targets in the chambers is used to compute the frequency of the variant allele in the sample.

Quantification of Membrane Ruffle Formation Using Scanning Electron Microscopy

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2025

This video demonstrates sample preparation, fixation, and imaging of a macrophage cell that displays membrane ruffles using scanning electron microscopy, SEM. Detailed information about membrane morphology and organization is crucial for understanding the physiological condition of the cells.

HUVEC Tube-formation Assay to Evaluate the Impact of Natural Products on Angiogenesis

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Cited by 37 •

2019

Here, we evaluate the effects of the water extract of Ruta graveolens on vessel network formation by using a tube formation assay on a gelled basement matrix.

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