Focus Forming Assay

A focus forming assay is a virological method that measures infectious virus by detecting localized groups of infected cells, called foci, and is useful for studying pathogen replication and infectivity. In this assay, a virus sample infects a susceptible cell monolayer under conditions that restrict widespread viral spread; viral antigens are then detected by immunostaining, and the resulting foci are counted to calculate infectious units, typically as focus-forming units per milliliter. The method supports viral titer determination, antiviral drug evaluation, neutralization testing, and characterization of infection, providing a sensitive alternative to plaque assays when infected cells do not produce visible plaques.

Focus Forming Assay - Related Videos

Research

JoVE EoE - Immunodiagnostics

A Focus-Forming Assay for Quantifying Virus Titers in the Organs of an Infected Mouse

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2025

The video demonstrates a procedure for quantifying the Zika virus in multiple mouse organs via a focus-forming assay. The process involves infecting mammalian cell monolayers with virus-infected tissue homogenates, followed by the use of methyl cellulose to prevent viral spread. Subsequently, immunostaining is employed to enable precise quantification and measurement of organ-specific infectivity.

Research

JoVE Journal - Biology
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A Quantitative Assay for Insulin-expressing Colony-forming Progenitors

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Cited by 11 •

2011

A three-dimensional clonogenic assay that allows pancreatic-like progenitors to differentiate into insulin-expressing colonies is described. This method takes advantage of semi-solid media containing methylcellulose, Matrigel and growth factors, in which single progenitors proliferate and differentiate in vitro, permitting quantification of the number of functional progenitors in a population.

Focus Formation: A Cell-based Assay to Determine the Oncogenic Potential of a Gene

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Cited by 23 •

2014

The Focus Formation Assay provides a straightforward method to assess the transforming potential of a candidate oncogene.

Colony Forming Cell (CFC) Assay for Human Hematopoietic Cells

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Cited by 43 •

2010

The colony forming cell (CFC) assay is an in vitro assay in which hematopoietic progenitors form colonies in a semi-solid medium. A combination of colony morphology, cell morphology, and flow cytometry are used to assess the ability of the progenitors to proliferate and differentiate along the different hematopoietic lineages.

Phototaxis Assay of Filamentous Cyanobacteria Using Focused Light Illumination

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2025

Source: Weber, N. et. al., Natural Transformation, Protein Expression, and Cryoconservation of the Filamentous Cyanobacterium Phormidium lacuna. J. Vis. Exp. (2022)This video demonstrates a focused LED-based assay for studying phototaxis in filamentous cyanobacteria. The bacteria migrate toward the light source, forming a dense accumulation at the illuminated center, which is visualized and quantified through pixel intensity analysis of the captured image.

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