Coronal Plane Sectioning

Coronal plane sectioning is the process of cutting a biological specimen or anatomical structure along a vertical plane that separates the anterior, or front, portion from the posterior, or back, portion. In practice, researchers orient the specimen to its anatomical axes and produce sequential slices through this plane, often using a microtome for prepared tissue. These sections provide standardized views for comparing regional anatomy, tracing structures across adjacent layers, and assessing changes associated with development, disease, or experimental treatments. Coronal sections are especially useful in histology, neurobiology, developmental biology, and anatomical research.

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JoVE EoE - Neuropathology

Treatment of Rat Coronal Slices with a Neurotoxic Peptide

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2025

This video demonstrates the procedure to prepare and treat rat brain hemislices with a neurotoxic peptide to mimic neurodegeneration. The protocol allows for analyzing neurodegenerative events by directly comparing control and treated slices in the same anatomical plane.

Generating a Coronal Brain Slice Exposing the Amygdala Regions from a Mouse Brain

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2025

This video demonstrates the preparation of thin coronal brain slices from a murine brain, exposing the amygdala regions rich in synaptic connections from the medial prefrontal cortex. The slices are then recovered in oxygenated artificial cerebrospinal fluid to maintain neuronal viability.

Immunohistochemical Staining of Rat Coronal Tissue Cryosections for Microglia and Neurons

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2025

Source: Evilsizor, M. N., et. al., Primer for Immunohistochemistry on Cryosectioned Rat Brain Tissue: Example Staining for Microglia and Neurons. J. Vis. Exp. (2015)This video demonstrates a step-by-step immunohistochemistry staining procedure on cryosectioned rat brain tissue to visualize the spatial arrangement of microglia and neurons.

Measurement of Evoked Potassium Ion Concentration Dynamics in Coronal Hippocampal Slices

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2025

The video demonstrates evoked potassium ion concentration dynamics on electrical stimulation of mouse coronal hippocampal brain slices. A bipolar stimulating electrode is inserted into the stratum radiatum of the CA3 region in the hippocampus, and a potassium-ion selective electrode is placed in the CA1 stratum radiatum. The electrical stimulation causes an action potential, resulting in potassium ion release. Finally, the lack of evoked potassium ion response in the presence of an inhibitory...

Determining the Ice-binding Planes of Antifreeze Proteins by Fluorescence-based Ice Plane Affinity

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Cited by 48 •

2014

Antifreeze proteins (AFPs) bind to specific planes of ice to prevent or slow ice growth. Fluorescence-based ice plane affinity (FIPA) analysis is a modification of the original ice-etching method for determination of AFP-bound ice planes. AFPs are fluorescently labeled, incorporated into macroscopic single ice crystals, and visualized under UV light.

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