Dead Cell Removal

Dead cell removal is the biological process of identifying and clearing cells that have died, preventing their remains from disrupting tissue function or provoking harmful inflammation. During efferocytosis, phagocytes such as macrophages recognize “find-me” and “eat-me” signals on dying cells, engulf cellular debris, and digest it within phagolysosomes. In immunology and infection research, this process helps maintain tissue homeostasis, shapes inflammatory responses, and influences how the immune system responds to pathogens. Defective clearance can prolong inflammation, impair tissue repair, or alter host defense, making dead cell removal important for studying infection, autoimmunity, and inflammatory disease.

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Research

JoVE Journal - Biology

Quantification of Proliferative and Dead Cells in Enteroids

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Cited by 2 •

2020

The presented protocol uses flow cytometry to quantify the number of proliferating and dead cells in cultured mouse enteroids. This method is helpful to evaluate the effects of drug treatment on organoid proliferation and survival.

Research

JoVE Journal - Neuroscience
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In vitro Quantitative Imaging Assay for Phagocytosis of Dead Neuroblastoma Cells by iPSC-Macrophages

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Cited by 7 •

2021

Neurodegenerative diseases are associated with dysregulated microglia functions. This article outlines an in vitro assay of phagocytosis of neuroblastoma cells by iPSC-macrophages. Quantitative microscopy readouts are described for both live-cell time-lapse imaging and fixed-cell high-content imaging.

Alternative Method of Removing Otoliths from Sturgeon

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Cited by 3 •

2016

The goal of the protocol is to show an effective method to extract the otoliths from sturgeon carcasses.

An Optimized LIVE/DEAD Assay Coupled with Flow Cytometry for Quantifying Post-Stress Survival in Yeast Cells

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Cited by 2 •

2025

Here, we present a protocol to quantify post-stress survival in yeast samples. The assay employs two fluorescent dyes, SYTO 9 and propidium iodide (PI), to quantify plasma membrane integrity. It uses flow cytometry to provide quantitative and reproducible estimates of the live, dead, and damaged cell fractions for post-oxidative-stress samples.

C. elegans Blastomere Dissection: A Method to Remove the Eggshell and Dissociate Embryonic Cells

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2023

This video introduces a method of isolating C. elegans blastomeres from early embryos. The resulting cells are suitable for cell culture or ex vivo experiments.

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