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JUMPn: En strømlinet applikation til protein co-ekspressionsklynger og netværksanalyse i proteomics

Article DOI: 10.3791/62796-v • 07:28 min • October 19th, 2021
October 19th, 2021 •
1, 1,2, 2, 2, 2,3, 2, 2, 1,2, 1,2
1Departments of Structural Biology and Developmental Neurobiology, St. Jude Children’s Research Hospital, 2Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, 3Department of Computational Biology, St. Jude Children’s Research Hospital

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Vi præsenterer et systembiologisk værktøj JUMPn til at udføre og visualisere netværksanalyse for kvantitative proteomics-data med en detaljeret protokol, herunder dataforbehandling, co-ekspressionsklyngedannelse, vejberigelse og protein-protein interaktionsnetværksanalyse.

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