Hindbrain Imaging

Hindbrain imaging is a set of methods for visualizing the anatomy, activity, and cellular responses of the hindbrain, a brainstem region that coordinates essential sensory, motor, and autonomic functions. Magnetic resonance imaging uses magnetic fields and radiofrequency signals to generate tissue contrast, while microscopy can track fluorescently labeled cells in living model organisms. In immunology and infection research, these approaches help monitor inflammation, pathogen-associated changes, and immune-cell recruitment within or near hindbrain tissue. Such measurements connect structural or cellular alterations with disease progression, treatment response, and neurological outcomes, supporting mechanistic studies and evaluation of interventions.

Hindbrain Imaging - Related Videos

Research

JoVE Journal - Neuroscience

Labeling and Imaging Cells in the Zebrafish Hindbrain

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Cited by 7 •

2010

Key to understanding the morphogenetic processes that shape the early embryo is the ability to image cells at high resolution. We describe here a technique for labeling single cells or small clusters of cells in whole zebrafish embryos with membrane-targeted Green Fluorescent Protein.

Research

JoVE Journal - Neuroscience
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Mouse Hindbrain Ex Vivo Culture to Study Facial Branchiomotor Neuron Migration

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Cited by 4 •

2014

Embryonic neurons are born in the ventricular zone of the neural tube, but migrate to reach appropriate targets. Facial branchiomotor (FBM) neurons are a useful model to study neuronal migration. This protocol describes the wholemount ex vivo culture of mouse embryo hindbrains to investigate mechanisms that regulate FBM migration.

Research

JoVE Journal - Neuroscience
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The Mouse Hindbrain As a Model for Studying Embryonic Neurogenesis

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Cited by 2 •

2018

This article demonstrates how the mouse embryonic hindbrain can be used as a model for studying developmental neurogenesis in both whole organ and tissue section preparations.

Electroporation of the Hindbrain to Trace Axonal Trajectories and Synaptic Targets in the Chick Embryo

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Cited by 9 •

2013

How neuronal networks are established in the embryonic brain is a fundamental question in developmental neurobiology. Here we combined an electroporation technique with novel genetic tools, such as Cre/Lox–plasmids and PiggyBac-mediated DNA transposition system in the avian hindbrain to label dorsal interneurons and track their axonal projections and synaptic targets at various developmental stages.

Live Imaging of the Zebrafish Embryonic Brain by Confocal Microscopy

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Cited by 27 •

2009

In this video, we demonstrate a method by which to analyze the developing vertebrate brain in live zebrafish embryos at single cell resolution by confocal microscopy. This includes the method by which we inject the single-cell zebrafish embryo and subsequently mount and image the developing brain.

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