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Addressing Metabolomics Data Analysis Using Advanced Bioinformatics Tools

November 10th, 2023

Emerging Technologies and Advanced Tools for Decoding Metabolomics Data Analysis (Video) | JoVE

Emerging Technologies and Advanced Tools for Decoding Metabolomics Data Analysis (Video) | JoVE

01:54 min

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CorrelationCalculator: A Bioinformatics Tool for Building Single Interaction Metabolites Network Based on Expression Data (Video) | JoVE

CorrelationCalculator: A Bioinformatics Tool for Building Single Interaction Metabolites Network Based on Expression Data (Video) | JoVE

02:15 min

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Filigree: A Bioinformatics Tool for Building Differential Network Clustering and Enrichment Analysis (Video) | JoVE

Filigree: A Bioinformatics Tool for Building Differential Network Clustering and Enrichment Analysis (Video) | JoVE

03:20 min

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Gayatri Iyer¹, Marci Brandenburg^1,2, Christopher Patsalis¹, George Michailidis³, Alla Karnovsky¹

¹Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, ²Taubman Health Sciences Library, University of Michigan, Ann Arbor, ³Department of Statistics, University of Florida

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我们提出了 CorrelationCalculator 和 Filigree，这两个工具用于数据驱动的网络构建和代谢组学数据分析。 CorrelationCalculator 支持基于表达数据构建代谢物的单一相互作用网络，而 Filigree 允许构建差异网络，然后进行网络聚类和富集分析。

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