Addressing Metabolomics Data Analysis Using Advanced Bioinformatics Tools

November 10th, 2023

Emerging Technologies and Advanced Tools for Decoding Metabolomics Data Analysis (Video) | JoVE

01:54 min

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CorrelationCalculator: A Bioinformatics Tool for Building Single Interaction Metabolites Network Based on Expression Data (Video) | JoVE

02:15 min

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Filigree: A Bioinformatics Tool for Building Differential Network Clustering and Enrichment Analysis (Video) | JoVE

03:20 min

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Gayatri Iyer¹, Marci Brandenburg^1,2, Christopher Patsalis¹, George Michailidis³, Alla Karnovsky¹

¹Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, ²Taubman Health Sciences Library, University of Michigan, Ann Arbor, ³Department of Statistics, University of Florida

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本稿では、メタボロミクスデータのデータ駆動型ネットワーク構築と解析のための2つのツールであるCorrelationCalculatorとFiligreeを紹介します。 CorrelationCalculator は、発現データに基づく代謝物の単一の相互作用ネットワークの構築をサポートし、Filigree は差動ネットワークの構築と、それに続くネットワークのクラスタリングと濃縮分析を可能にします。

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Addressing Metabolomics Data Analysis Using Advanced Bioinformatics Tools

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