Waiting
Login processing...

Trial ends in Request Full Access Tell Your Colleague About Jove
Click here for the English version

Neuroscience

شارك في تحليل بنية الدماغ والدالة باستخدام الرنين المغناطيسي الوظيفي وانتشارها المرجحة التصوير

Published: November 8, 2012 doi: 10.3791/4125

References

  1. Wedeen, V. anJ., Hagmann, P., Tseng, W. I., Reese, T. G., Weisskoff, R. M. Mapping complex tissue architecture with diffusion spectrum magnetic resonance imaging. Magnetic Resonance in Medicine. 54 (6), 1377-1386 (2005).
  2. Wedeen, V. J., Wang, R. P., Schmahmann, J. D., Benner, T., Tseng, W. Y. I., Dai, G., Pandya, D. N., et al. Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers. NeuroImage. 41 (4), 1267-1277 (2008).
  3. Pipe, J. Pulse Sequences for Diffusion-weighted MRI. Diffusion MRI: From quantitative measurement to in-vivo neuroanatomy. , 1st, Elsevier. London. 12-35 (2009).
  4. Le Bihan, D., Poupon, C., Amadon, A., Lethimonnier, F. Artifacts and pitfalls in diffusion MRI. Journal of Magnetic Resonance Imaging: JMRI. 24 (3), 478-488 (2006).
  5. Tuch, D. S. Q-ball imaging. Magnetic Resonance in Medicine. 52 (6), 1358-1372 (2004).
  6. Sakaie, K. E., Lowe, M. J. An objective method for regularization of fiber orientation distributions derived from diffusion-weighted MRI. NeuroImage. 34 (1), 169-176 (2007).
  7. Reese, T. G., Benner, T., Wang, R., Feinberg, D. A., Wedeen, V. J. Halving imaging time of whole brain diffusion spectrum imaging and diffusion tractography using simultaneous image refocusing in EPI. Journal of Magnetic Resonance Imaging. 29 (3), 517-522 (2009).
  8. Cox, R. W. AFNI: software for analysis and visualization of functional magnetic resonance neuroimages. Computers and Biomedical Research. 29 (3), 162-173 (1996).
  9. Cox, R. W., Hyde, J. S. Software tools for analysis and visualization of fMRI data. NMR in Biomedicine. 10 (4-5), 171-178 (1997).
  10. Goebel, R. BRAINVOYAGER: a program for analyzing and visualizing functional and structural magnetic resonance data sets. NeuroImage. 3, S604 (1996).
  11. Smith, S. M., Jenkinson, M., Woolrich, M. W., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., et al. Advances in functional and structural MR image analysis and implementation as FSL. NeuroImage. 23, Suppl 1. S208-S219 (2004).
  12. Woolrich, M. W., Jbabdi, S., Patenaude, B., Chappell, M., Makni, S., Behrens, T., Beckmann, C., et al. Bayesian analysis of neuroimaging data in FSL. NeuroImage. 45, Suppl 1. S173-S186 (2009).
  13. Friston, K. J. Statistical parametric mapping: the analysis of functional brain images. , Academic Press. (2007).
  14. Nichols, T., Hayasaka, S. Controlling the familywise error rate in functional neuroimaging: a comparative review. Statistical Methods in Medical Research. 12 (5), 419-446 (2003).
  15. Benjamini, Y., Hochberg, Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society, Series B (Methodological. 57 (1), 289-300 (1995).
  16. Logan, B. R., Rowe, D. B. An evaluation of thresholding techniques in fMRI analysis. NeuroImage. 22, 95-108 (2004).
  17. Basser, P. J., Mattiello, J., LeBihan, D. Estimation of the effective self-diffusion tensor from the NMR spin echo. Journal of Magnetic Resonance, Series B. 103 (3), 247-254 (1994).
  18. Basser, P. J., Mattiello, J., LeBihan, D. MR diffusion tensor spectroscopy and imaging. Biophysical Journal. 66 (1), 259-267 (1994).
  19. Frank, L. R. Anisotropy in high angular resolution diffusion-weighted MRI. Magnetic Resonance in Medicine. 45 (6), 935-939 (2001).
  20. Frank, L. R. Characterization of anisotropy in high angular resolution diffusion-weighted MRI. Magnetic Resonance in Medicine. 47 (6), 1083-1099 (2002).
  21. Tuch, D. S., Reese, T. G., Wiegell, M. R., Makris, N., Belliveau, J. W., Wedeen, V. J. High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity. Magnetic Resonance in Medicine. 48 (4), 577-582 (2002).
  22. Descoteaux, M., Angelino, E., Fitzgibbons, S., Deriche, R. Regularized, fast, and robust analytical Q-ball imaging. Magnetic Resonance in Medicine. 58 (3), 497-510 (2007).
  23. Tuch, D. S. Q-ball imaging. Magnetic Resonance in Medicine. 52 (6), 1358-1372 (2004).
  24. Yeh, F. C., Wedeen, V. J., Tseng, W. -Y. I. Generalized Q-sampling imaging. IEEE Transactions on Medical Imaging. 29 (9), 1626-1635 (2010).
  25. Wang, R., Benner, T., Sorensen, A. G., Wedeen, V. J. Diffusion Toolkit: a software package for diffusion imaging data processing and tractography. Proc. Intl. Soc. Mag. Reson. Med. , 3720 (2007).
  26. Sundaram, S. K., Kumar, A., Makki, M. I., Behen, M. E., Chugani, H. T., Chugani, D. C. Diffusion tensor imaging of frontal lobe in autism spectrum disorder. Cereb Cortex. 18 (11), 2659-2665 (2008).
  27. Greenberg, A. S., Verstynen, T., Chiu, Y. -C., Yantis, S., Schneider, W., Behrmann, M. Visuotopic Cortical Connectivity Underlying Attention Revealed with White-Matter Tractography. The Journal of Neuroscience. 32 (8), 2773-2782 (2012).
  28. Slotnick, S. D., Yantis, S. Efficient acquisition of human retinotopic maps. Human Brain Mapping. 18 (1), 22-29 (2003).
  29. Greenberg, A. S., Esterman, M., Wilson, D., Serences, J. T., Yantis, S. Control of spatial and feature-based attention in frontoparietal cortex. The Journal of Neuroscience. 30 (43), 14330-14339 (2010).
  30. Kastner, S., Ungerleider, L. G. Mechanisms of visual attention in the human cortex. Annual Review of Neuroscience. 23, 315-341 (2000).
  31. Bürgel, U., Amunts, K., Hoemke, L., Mohlberg, H., Gilsbach, J. M., Zilles, K. White matter fiber tracts of the human brain: Three-dimensional mapping at microscopic resolution, topography and intersubject variability. NeuroImage. 29 (4), 1092-1105 (2006).
  32. Behrens, T. E. J., Jbabdi, S. MR Diffusion Tractography. Diffusion MRI: From quantitative measurement to in-vivo neuroanatomy. , 1st, Elsevier. London. 333-352 (2009).
  33. Verstynen, T., Jarbo, K., Pathak, S., Schneider, W. In vivo mapping of microstructural somatotopies in the human corticospinal pathways. Journal of Neurophysiology. 105 (1), 336-346 (2011).
  34. Jarbo, K., Verstynen, T., Schneider, W. In vivo quantification of global connectivity in the human corpus callosum. NeuroImage. , In press (2012).
  35. Verstynen, T., Badre, D., Jarbo, K., Schneider, W. Microstructural organizational patterns in the human corticostriatal system. , Under review (2012).
  36. Wang, Y., Fernández-Miranda, J. C., Verstynen, T., Pathak, S., Schneider, W. Identifying human brain tracts with tractography and fiber microdissection: mapping connectivity of the middle longitudinal fascicle as the dorsal auditory pathway. , Under review (2012).
  37. Fernandez-Miranda, J. C., Engh, J. A., Pathak, S. K., Madhok, R., Boada, F. E., Schneider, W., Kassam, A. B. High-definition fiber tracking guidance for intraparenchymal endoscopic port surgery. Journal of Neurosurgery. 113 (5), 990-999 (2010).
  38. Fernandez-Miranda, J. C., Engh, J., Pathak, S., Wang, Y., Jarbo, K., Verstynen, T., Boada, F., Schneider, W., Friedlander, R. High-definition fiber tractography of the human brain: neuroanatomical validation and neurosurgical applications. , Under review (2012).
  39. Shin, S., Verstynen, T., Pathak, S., Jarbo, K., Hricik, A., Maserati, M., Beers, S., Puccio, A. M., Okonkwo, D., Schneider, W. High definition fiber tracking for assessment of neurologic deficit in a case of traumatic brain injury. Journal of Neurosurgery. , In press (2012).
  40. Mori, S., Crain, B. J., Chacko, V. P., Van Zijl, P. C. M. Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging. Annals of Neurology. 45 (2), 265-269 (1999).
  41. Tournier, J., Mori, S., Leemans, A. Diffusion tensor imaging and beyond. Magnetic Resonance in Medicine. 65 (6), 1532-1556 (2011).
  42. Seunarine, K. K., Alexander, D. C. Multiple Fibers: Beyond the Diffusion Tensor. Diffusion MRI: From quantitative measurement to in-vivo neuroanatomy. , 1st, Elsevier. London. (2009).
شارك في تحليل بنية الدماغ والدالة باستخدام الرنين المغناطيسي الوظيفي وانتشارها المرجحة التصوير
Play Video
PDF DOI

Cite this Article

Phillips, J. S., Greenberg, A. S.,More

Phillips, J. S., Greenberg, A. S., Pyles, J. A., Pathak, S. K., Behrmann, M., Schneider, W., Tarr, M. J. Co-analysis of Brain Structure and Function using fMRI and Diffusion-weighted Imaging. J. Vis. Exp. (69), e4125, doi:10.3791/4125 (2012).

Less
Copy Citation Download Citation Reprints and Permissions
View Video

Get cutting-edge science videos from JoVE sent straight to your inbox every month.

Waiting X
Simple Hit Counter