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Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo

Article DOI: 10.3791/57214-v • 08:32 min • May 4th, 2018
May 4th, 2018 •
1,2, 3,4, 3,5, 1, 6, 2,7, 1, 1,3, 1,3,8, 3
1Department of Radiology, University of California, San Diego, 2Central European Institute of Technology, Brno University of Technology, 3Department of Neurosciences, University of California, San Diego, 4Department of Physics, John Carroll University, 5Department of Biomedical Engineering, Boston University, 6Bioengineering Undergraduate Program, University of California, San Diego, 7Institute of Physical Engineering, Faculty of Mechanical Engineering, Brno University of Technology, 8Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School

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A graphical user interface for exploring and sharing a database of optogenetically-induced vascular responses in mouse somatosensory cortex in vivo measured by 2-photon microscopy is presented. It allows browsing the data, criteria-based selection, averaging, localization of measurements within a 3D volume of vasculature and exporting the data.

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Neurovascular Network Explorer 2.0 NNE 2.0 MATLAB Graphical User Interface Visualization Inspection Selection Export Optogenetically-evoked Vascular Diameter Changes Two Photon Microscopy Localization 3D Structure Brain Function Database Sharing Data NNE 2.execute Time Courses Perimeters Vdb.mat Cortical Depth Range Branching Order Baseline Diameter Range Subjects Analysis
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