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DOI: 10.3791/56901-v
This article presents a microfluidic method for analyzing individual bacterial cell lineages, specifically using Bacillus subtilis. The technique allows for long-term observation of cell generations under controlled growth conditions, addressing limitations of traditional microbiological methods.
We present a method for the microfluidic analysis of individual bacterial cell lineages using Bacillus subtilis as an example. The method overcomes shortcomings of traditional analytical methods in microbiology by allowing observation of hundreds of cell generations under tightly controllable and uniform growth conditions.
The overall goal of this microfluidic experimental set-up is to enable the longterm observation of individual bacterial cells under constant, highly controlled environmental conditions. This method can help answer key questions in the bacterial physiology field, such as what are the longterm response patterns of individual cells to stress or how does a heterogeneous phenotype across a population vary with time. The main advantage of this technique is that we can observe individual cell lineages for tens or even hundreds of generations, under constant, uniform and highly controlled environmental conditions.
After preparing PDMS polymer according to the text protocol, place a silicone master on a piece of unbroken aluminum foil in a polystyrene Petri dish. Pour the degassed PDMS mixture over the master to a depth of approximately five millimeters. Then degas the dish for at least 10 minutes.
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