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Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
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Cancer Research
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JoVE Journal Cancer Research
Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

DOI:
10.3791/59238-v

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07:41 min

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May 17, 2019

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, , , , , , , ,
1Department of Thyroid and Breast Surgery,First Affiliated Hospital of Shantou University Medical College, 2Department of Medical Oncology,Cancer Hospital of Shantou University Medical College, 3Shantou University Medical College

Chapters

  • 00:04Title
  • 01:15Expression Pattern Analysis
  • 01:58Expression Correlation Analysis
  • 02:22Subgroup Analysis
  • 03:35Survival Analysis
  • 05:08Results: Data Mining and Integrative Analysis using Multiple Publicly Accessible Databases
  • 07:13Conclusion

Summary

Automatic Translation

Automatic Translation

Here, we present a protocol to explore the biomarker and survival predictor of breast cancer based on the comprehensive analysis of pooled clinical datasets derived from a variety of publicly accessible databases, using the strategy of expression, correlation and survival analysis step by step.

Tags

Data MiningIntegrative AnalysisBiomarkerBreast CancerPublic DatabasesONCOMINEBC Gene-Expression MinerGOBOGene ExpressionSurvival PredictorMolecular SubtypesData VisualizationData Interpretation

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