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Find video protocols related to scientific articles indexed in Pubmed.
Mid-infrared spectroscopic imaging enabled by an array of Ge-filled waveguides in a microstructured optical fiber probe.
Opt Express
PUBLISHED: 11-18-2014
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We demonstrate mid-infrared spectroscopic imaging using a unique optical fiber probe consisting of an array of Ge waveguide cores embedded in a silica fiber matrix. Biological tissue slices are characterized to illustrate its potential endoscopic uses. The fiber probe based transmission measurements show excellent agreement with the result obtained from standard Fourier Transform Infrared spectroscopy transmission measurements in the wavelength range of 3289.8 nm to 3383.3 nm, where fat and muscle tissues could be spectroscopically distinguished.
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Fluorescence lifetime based characterization of active and tunable plasmonic nanostructures.
Opt Express
PUBLISHED: 10-17-2014
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We report a non-contact method that utilizes fluorescence lifetime (FL) to characterize morphological changes of a tunable plasmonic nanostructure with nanoscale accuracy. The key component of the plasmonic nanostructure is pH-responsive polyelectrolyte multilayers (PEMs), which serve as a dynamically tunable "spacer" layer that separates the plasmonic structure and the fluorescent materials. The validity of our method is confirmed through direct comparison with ellipsometry and atomic force microscopy (AFM) measurements. Applying the FL-based approach, we find that a monolayer polycation film responds to pH changes with significantly less hysteresis than a thicker multilayer film with polyelectrolytes of both charges. Additionally, we characterize an active and tunable plasmonic nanostructure composed of self-assembled fluorescent dye (Texas Red), pH-sensitive PEMs, and gold nanospheres adsorbed on the PEM surface. Our results point towards the possibility of using stimulus-sensitive polymers to construct active and tunable plasmonic nanodevices.
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Impact of lithography on the fluorescence dynamics of self-assembled fluorophores.
Opt Express
PUBLISHED: 06-13-2014
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Micro- and nano-patterned fluorescent materials are important for many photonic devices and applications. In this paper, we investigate the impact of three common lithographical techniques, deposition and removal of sacrificial masks, ultraviolet ablation, and focused ion beam milling, on self-assembled fluorophores. We find that different patterning techniques can dramatically change the fluorescence lifetime of the fluorophores and that the degree of modification depends on the patterning techniques.
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Tannin-rich fraction from pomegranate rind damages membrane of Listeria monocytogenes.
Foodborne Pathog. Dis.
PUBLISHED: 01-21-2014
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Pomegranate rind has been reported to inhibit several foodborne pathogens, and its antimicrobial activity has been attributed mainly to its tannin fraction. This study aimed to investigate the antimicrobial activity of the tannin-rich fraction from pomegranate rind (TFPR) against Listeria monocytogenes and its mechanism of action. The tannin-related components of TFPR were analyzed by high-performance liquid chromatography and liquid chromatography-mass spectrometry, and the minimum inhibitory concentration (MIC) of TFPR was determined using the agar dilution method. Extracellular potassium concentration, the release of cell constituents, intra- and extracellular ATP concentrations, membrane potential, and intracellular pH (pHin) were measured to elucidate a possible antibacterial mechanism. Punicalagin (64.2%, g/g) and ellagic acid (3.1%, g/g) were detected in TFPR, and the MICs of TFPR were determined to be 1.25-5.0?mg/mL for different L. monocytogenes strains. Treatment with TFPR induced a decrease of the intracellular ATP concentration, an increase of the extracellular concentrations of potassium and ATP, and the release of cell constituents. A reduction of pHin and cell membrane hyperpolarization were observed after treatment. Electron microscopic observations showed that the cell membrane structures of L. monocytogenes were apparently impaired by TFPR. It is concluded that TFPR could destroy the integrity of the cell membrane of L. monocytogenes, leading to a loss of cell homeostasis. These findings indicate that TFPR has the potential to be used as a food preservative in order to control L. monocytogenes contamination in food and reduce the risk of listeriosis.
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High quality factor silica microspheres functionalized with self-assembled nanomaterials.
Opt Express
PUBLISHED: 10-10-2013
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With extremely low material absorption and exceptional surface smoothness, silica-based optical resonators can achieve extremely high cavity quality (Q) factors. However, the intrinsic material limitations of silica (e.g., lack of second order nonlinearity) may limit the potential applications of silica-based high Q resonators. Here we report some results in utilizing layer-by-layer self-assembly to functionalize silica microspheres with nonlinear and plasmonic nanomaterials while maintaining Q factors as high as 10(7). We compare experimentally measured Q factors with theoretical estimates, and find good agreement.
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What is Visualize?

JoVE Visualize is a tool created to match the last 5 years of PubMed publications to methods in JoVE's video library.

How does it work?

We use abstracts found on PubMed and match them to JoVE videos to create a list of 10 to 30 related methods videos.

Video X seems to be unrelated to Abstract Y...

In developing our video relationships, we compare around 5 million PubMed articles to our library of over 4,500 methods videos. In some cases the language used in the PubMed abstracts makes matching that content to a JoVE video difficult. In other cases, there happens not to be any content in our video library that is relevant to the topic of a given abstract. In these cases, our algorithms are trying their best to display videos with relevant content, which can sometimes result in matched videos with only a slight relation.