Motoyuki Ashikari

Publications

• Genes Relating to Flood Tolerance Were Pseudogenized in Normal Cultivated Rice
  Plants (Basel, Switzerland). Jan, 2022  |   Pubmed ID: 35161357
• Noninvasive Imaging of Hollow Structures and Gas Movement Revealed the Gas Partial-pressure-gradient-driven Long-distance Gas Movement in the Aerenchyma Along the Leaf Blade to Submerged Organs in Rice
  The New Phytologist. 12, 2021  |   Pubmed ID: 34498274
• Marker-Assisted Introgression and Stacking of Major QTLs Controlling Grain Number () and Number of Primary Branching () to NERICA Cultivars
  Plants (Basel, Switzerland). Apr, 2021  |   Pubmed ID: 33922112
• Exploring the Loci Responsible for Awn Development in Rice Through Comparative Analysis of All AA Genome Species
  Plants (Basel, Switzerland). Apr, 2021  |   Pubmed ID: 33917982
• Fine Mapping and Characterization of Two Novel Quantitative Trait Loci for Early Seedling Growth in Rice
  Planta. Feb, 2021  |   Pubmed ID: 33527150
• Antagonistic Regulation of the Gibberellic Acid Response During Stem Growth in Rice
  Nature. 08, 2020  |   Pubmed ID: 32669710
• Diverse Panicle Architecture Results from Various Combinations of Prl5/GA20ox4 and Pbl6/APO1 Alleles
  Communications Biology. 06, 2020  |   Pubmed ID: 32528064
• Metabolite and Phytohormone Profiling Illustrates Metabolic Reprogramming As an Escape Strategy of Deepwater Rice During Partially Submerged Stress
  Metabolites. Feb, 2020  |   Pubmed ID: 32075002
• Correction To: Sucrose Affects the Developmental Transition of Rhizomes in Oryza Longistaminata
  Journal of Plant Research. Jul, 2019  |   Pubmed ID: 31037514
• Diel O2 Dynamics in Partially and Completely Submerged Deepwater Rice: Leaf Gas Films Enhance Internodal O2 Status, Influence Gene Expression and Accelerate Stem Elongation for 'Snorkelling' During Submergence
  Plant & Cell Physiology. May, 2019  |   Pubmed ID: 30668838
• Assembling the Genome of the African Wild Rice by Exploiting Synteny in Closely Related Species
  Communications Biology. 2018  |   Pubmed ID: 30320230
• Ethylene-gibberellin Signaling Underlies Adaptation of Rice to Periodic Flooding
  Science (New York, N.Y.). 07, 2018  |   Pubmed ID: 30002253
• Sucrose Affects the Developmental Transition of Rhizomes in Oryza Longistaminata
  Journal of Plant Research. Jul, 2018  |   Pubmed ID: 29740707
• Rice Leaf Hydrophobicity and Gas Films Are Conferred by a Wax Synthesis Gene (LGF1) and Contribute to Flood Tolerance
  The New Phytologist. 06, 2018  |   Pubmed ID: 29498045
• Introgression of a Functional Epigenetic OsSPL14 Allele into Elite Indica Rice Genomes Greatly Improved Panicle Traits and Grain Yield
  Scientific Reports. 03, 2018  |   Pubmed ID: 29497052
• Time-Course Transcriptomics Analysis Reveals Key Responses of Submerged Deepwater Rice to Flooding
  Plant Physiology. Apr, 2018  |   Pubmed ID: 29475897
• Construction of Rice Chromosome Segment Substitution Lines Harboring Genome and Evaluation of Yield-related Traits
  Breeding Science. Sep, 2017  |   Pubmed ID: 29085251
• EQTLs Regulating Transcript Variations Associated with Rapid Internode Elongation in Deepwater Rice
  Frontiers in Plant Science. 2017  |   Pubmed ID: 29081784
• A New Outlook on Sporadic Flowering of Bamboo
  Plant Signaling & Behavior. 07, 2017  |   Pubmed ID: 28650217
• Community Recommendations on Terminology and Procedures Used in Flooding and Low Oxygen Stress Research
  The New Phytologist. Jun, 2017  |   Pubmed ID: 28277605
• Hormone Distribution and Transcriptome Profiles in Bamboo Shoots Provide Insights on Bamboo Stem Emergence and Growth
  Plant & Cell Physiology. 04, 2017  |   Pubmed ID: 28204696
• Adapting Genotyping-by-Sequencing for Rice F2 Populations
  G3 (Bethesda, Md.). 03, 2017  |   Pubmed ID: 28082325
• A Single Base Change Explains the Independent Origin of and Selection for the Nonshattering Gene in African Rice Domestication
  The New Phytologist. Mar, 2017  |   Pubmed ID: 27861933
• Development of Chromosome Segment Substitution Lines Harboring Genomic Segments in Koshihikari and Evaluation of Yield-related Traits
  Breeding Science. Dec, 2016  |   Pubmed ID: 28163601
• Analysis of Rhizome Development in Oryza Longistaminata, a Wild Rice Species
  Plant & Cell Physiology. Oct, 2016  |   Pubmed ID: 27516415
• Loss of Function at RAE2, a Previously Unidentified EPFL, is Required for Awnlessness in Cultivated Asian Rice
  Proceedings of the National Academy of Sciences of the United States of America. Aug, 2016  |   Pubmed ID: 27466405
• Detection of Novel QTLs Regulating Grain Size in Extra-Large Grain Rice (Oryza Sativa L.) Lines
  Rice (New York, N.Y.). Dec, 2016  |   Pubmed ID: 27457210
• Oryza Sativa H+-ATPase (OSA) is Involved in the Regulation of Dumbbell-Shaped Guard Cells of Rice
  Plant & Cell Physiology. Jun, 2016  |   Pubmed ID: 27048369
• Development and Validation of Allele-specific SNP/indel Markers for Eight Yield-enhancing Genes Using Whole-genome Sequencing Strategy to Increase Yield Potential of Rice, Oryza Sativa L
  Rice (New York, N.Y.). Dec, 2016  |   Pubmed ID: 26987543
• Construction of a Versatile SNP Array for Pyramiding Useful Genes of Rice
  Plant Science : an International Journal of Experimental Plant Biology. Jan, 2016  |   Pubmed ID: 26566831
• Two Tightly Linked Genes at the Hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice
  Molecular Plant. Feb, 2016  |   Pubmed ID: 26455463
• Convergent Loss of Awn in Two Cultivated Rice Species Oryza Sativa and Oryza Glaberrima Is Caused by Mutations in Different Loci
  G3 (Bethesda, Md.). Sep, 2015  |   Pubmed ID: 26338659
• Exploring the Power of Plants to Overcome Environmental Stresses
  Rice (New York, N.Y.). 2015  |   Pubmed ID: 25844115
• Rare Allele of a Previously Unidentified Histone H4 Acetyltransferase Enhances Grain Weight, Yield, and Plant Biomass in Rice
  Proceedings of the National Academy of Sciences of the United States of America. Jan, 2015  |   Pubmed ID: 25535376
• A Mathematical Model of Phloem Sucrose Transport As a New Tool for Designing Rice Panicle Structure for High Grain Yield
  Plant & Cell Physiology. Apr, 2015  |   Pubmed ID: 25516572
• QTL Analysis of Internode Elongation in Response to Gibberellin in Deepwater Rice
  AoB PLANTS. Jun, 2014  |   Pubmed ID: 24946943
• Gibberellin Biosynthesis and Signal Transduction is Essential for Internode Elongation in Deepwater Rice
  Plant, Cell & Environment. Oct, 2014  |   Pubmed ID: 24891164
• Development and Evaluation of Chromosome Segment Substitution Lines (CSSLs) Carrying Chromosome Segments Derived from Oryza Rufipogon in the Genetic Background of Oryza Sativa L
  Breeding Science. Mar, 2014  |   Pubmed ID: 24757386
• A WUSCHEL-related Homeobox 3B Gene, Depilous (dep), Confers Glabrousness of Rice Leaves and Glumes
  Rice (New York, N.Y.). Dec, 2012  |   Pubmed ID: 27234246
• Two Novel QTLs Regulate Internode Elongation in Deepwater Rice During the Early Vegetative Stage
  Breeding Science. Jun, 2012  |   Pubmed ID: 23136529
• Artificial Selection for a Green Revolution Gene During Japonica Rice Domestication
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2011  |   Pubmed ID: 21646530
• Vacuolar Proton Pumps and Aquaporins Involved in Rapid Internode Elongation of Deepwater Rice
  Bioscience, Biotechnology, and Biochemistry. 2011  |   Pubmed ID: 21228479
• Rice Growth Adapting to Deepwater
  Current Opinion in Plant Biology. Feb, 2011  |   Pubmed ID: 20934370
• OsSPL14 Promotes Panicle Branching and Higher Grain Productivity in Rice
  Nature Genetics. Jun, 2010  |   Pubmed ID: 20495564
• Stunt or Elongate? Two Opposite Strategies by Which Rice Adapts to Floods
  Journal of Plant Research. May, 2010  |   Pubmed ID: 20354754
• SSD1, Which Encodes a Plant-specific Novel Protein, Controls Plant Elongation by Regulating Cell Division in Rice
  Proceedings of the Japan Academy. Series B, Physical and Biological Sciences. 2010  |   Pubmed ID: 20228626
• Gain of Deleterious Function Causes an Autoimmune Response and Bateson-Dobzhansky-Muller Incompatibility in Rice
  Molecular Genetics and Genomics : MGG. Apr, 2010  |   Pubmed ID: 20140455
• Mitochondrial Gene in the Nuclear Genome Induces Reproductive Barrier in Rice
  Proceedings of the National Academy of Sciences of the United States of America. Jan, 2010  |   Pubmed ID: 20080642
• The Ethylene Response Factors SNORKEL1 and SNORKEL2 Allow Rice to Adapt to Deep Water
  Nature. Aug, 2009  |   Pubmed ID: 19693083
• A Rice Tryptophan Deficient Dwarf Mutant, Tdd1, Contains a Reduced Level of Indole Acetic Acid and Develops Abnormal Flowers and Organless Embryos
  The Plant Journal : for Cell and Molecular Biology. Oct, 2009  |   Pubmed ID: 19682283
• A Metastable DWARF1 Epigenetic Mutant Affecting Plant Stature in Rice
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2009  |   Pubmed ID: 19541604
• Highly Sensitive and High-throughput Analysis of Plant Hormones Using MS-probe Modification and Liquid Chromatography-tandem Mass Spectrometry: an Application for Hormone Profiling in Oryza Sativa
  Plant & Cell Physiology. Jul, 2009  |   Pubmed ID: 19369275
• Isolation and Characterization of Dominant Dwarf Mutants, Slr1-d, in Rice
  Molecular Genetics and Genomics : MGG. Feb, 2009  |   Pubmed ID: 19066966
• Gibberellin Regulates Pollen Viability and Pollen Tube Growth in Rice
  The Plant Cell. Dec, 2007  |   Pubmed ID: 18083909
• The GID1-mediated Gibberellin Perception Mechanism is Conserved in the Lycophyte Selaginella Moellendorffii but Not in the Bryophyte Physcomitrella Patens
  The Plant Cell. Oct, 2007  |   Pubmed ID: 17965273
• The Small Interfering RNA Production Pathway is Required for Shoot Meristem Initiation in Rice
  Proceedings of the National Academy of Sciences of the United States of America. Sep, 2007  |   Pubmed ID: 17804793
• Molecular Interactions of a Soluble Gibberellin Receptor, GID1, with a Rice DELLA Protein, SLR1, and Gibberellin
  The Plant Cell. Jul, 2007  |   Pubmed ID: 17644730
• Interaction of Two Recessive Genes, Hbd2 and Hbd3, Induces Hybrid Breakdown in Rice
  TAG. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. Jul, 2007  |   Pubmed ID: 17487470
• Gibberellin Receptor and Its Role in Gibberellin Signaling in Plants
  Annual Review of Plant Biology. 2007  |   Pubmed ID: 17472566
• The Rice SPINDLY Gene Functions As a Negative Regulator of Gibberellin Signaling by Controlling the Suppressive Function of the DELLA Protein, SLR1, and Modulating Brassinosteroid Synthesis
  The Plant Journal : for Cell and Molecular Biology. Nov, 2006  |   Pubmed ID: 17052323
• GAMYB Controls Different Sets of Genes and is Differentially Regulated by MicroRNA in Aleurone Cells and Anthers
  The Plant Journal : for Cell and Molecular Biology. Aug, 2006  |   Pubmed ID: 16792694
• Identification, Isolation and Pyramiding of Quantitative Trait Loci for Rice Breeding
  Trends in Plant Science. Jul, 2006  |   Pubmed ID: 16769240
• Morphological Alteration Caused by Brassinosteroid Insensitivity Increases the Biomass and Grain Production of Rice
  Plant Physiology. Jul, 2006  |   Pubmed ID: 16714407
• Expression of the Vacuolar Ca2+/H+ Exchanger, OsCAX1a, in Rice: Cell and Age Specificity of Expression, and Enhancement by Ca2+
  Plant & Cell Physiology. Jan, 2006  |   Pubmed ID: 16275657
• Overexpression of a GRAS Protein Lacking the DELLA Domain Confers Altered Gibberellin Responses in Rice
  The Plant Journal : for Cell and Molecular Biology. Nov, 2005  |   Pubmed ID: 16262715
• GIBBERELLIN INSENSITIVE DWARF1 Encodes a Soluble Receptor for Gibberellin
  Nature. Sep, 2005  |   Pubmed ID: 16193045
• Isolation of a Rice Regeneration Quantitative Trait Loci Gene and Its Application to Transformation Systems
  Proceedings of the National Academy of Sciences of the United States of America. Aug, 2005  |   Pubmed ID: 16091467
• Analysis of the Rice Mutant Dwarf and Gladius Leaf 1. Aberrant Katanin-mediated Microtubule Organization Causes Up-regulation of Gibberellin Biosynthetic Genes Independently of Gibberellin Signaling
  Plant Physiology. Aug, 2005  |   Pubmed ID: 16040652
• The Rice Brassinosteroid-deficient Dwarf2 Mutant, Defective in the Rice Homolog of Arabidopsis DIMINUTO/DWARF1, is Rescued by the Endogenously Accumulated Alternative Bioactive Brassinosteroid, Dolichosterone
  The Plant Cell. Aug, 2005  |   Pubmed ID: 15994910
• Dissection of the Phosphorylation of Rice DELLA Protein, SLENDER RICE1
  Plant & Cell Physiology. Aug, 2005  |   Pubmed ID: 15979983
• Cytokinin Oxidase Regulates Rice Grain Production
  Science (New York, N.Y.). Jul, 2005  |   Pubmed ID: 15976269
• Crown Rootless1, Which is Essential for Crown Root Formation in Rice, is a Target of an AUXIN RESPONSE FACTOR in Auxin Signaling
  The Plant Cell. May, 2005  |   Pubmed ID: 15829602
• Circadian-associated Rice Pseudo Response Regulators (OsPRRs): Insight into the Control of Flowering Time
  Bioscience, Biotechnology, and Biochemistry. Feb, 2005  |   Pubmed ID: 15725670
• A Novel Cytochrome P450 is Implicated in Brassinosteroid Biosynthesis Via the Characterization of a Rice Dwarf Mutant, Dwarf11, with Reduced Seed Length
  The Plant Cell. Mar, 2005  |   Pubmed ID: 15705958
• A Rice Semi-dwarf Gene, Tan-Ginbozu (D35), Encodes the Gibberellin Biosynthesis Enzyme, Ent-kaurene Oxidase
  Plant Molecular Biology. Mar, 2004  |   Pubmed ID: 15316288
• An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice
  Plant Physiology. Apr, 2004  |   Pubmed ID: 15075394
• GID2, an F-box Subunit of the SCF E3 Complex, Specifically Interacts with Phosphorylated SLR1 Protein and Regulates the Gibberellin-dependent Degradation of SLR1 in Rice
  The Plant Journal : for Cell and Molecular Biology. Feb, 2004  |   Pubmed ID: 14756772
• Loss-of-function Mutations of the Rice GAMYB Gene Impair Alpha-amylase Expression in Aleurone and Flower Development
  The Plant Cell. Jan, 2004  |   Pubmed ID: 14688295
• [GA Signal Transduction Via Protein Degradation]
  Seikagaku. The Journal of Japanese Biochemical Society. Nov, 2003  |   Pubmed ID: 14699847
• The Evolutionarily Conserved OsPRR Quintet: Rice Pseudo-response Regulators Implicated in Circadian Rhythm
  Plant & Cell Physiology. Nov, 2003  |   Pubmed ID: 14634161
• A Rice Brassinosteroid-deficient Mutant, Ebisu Dwarf (d2), is Caused by a Loss of Function of a New Member of Cytochrome P450
  The Plant Cell. Dec, 2003  |   Pubmed ID: 14615594
• Where Do Gibberellin Biosynthesis and Gibberellin Signaling Occur in Rice Plants?
  The Plant Journal : for Cell and Molecular Biology. Jul, 2003  |   Pubmed ID: 12834406
• Accumulation of Phosphorylated Repressor for Gibberellin Signaling in an F-box Mutant
  Science (New York, N.Y.). Mar, 2003  |   Pubmed ID: 12649483
• The OsTB1 Gene Negatively Regulates Lateral Branching in Rice
  The Plant Journal : for Cell and Molecular Biology. Feb, 2003  |   Pubmed ID: 12581309
• Loss-of-function of a Rice Brassinosteroid Biosynthetic Enzyme, C-6 Oxidase, Prevents the Organized Arrangement and Polar Elongation of Cells in the Leaves and Stem
  The Plant Journal : for Cell and Molecular Biology. Nov, 2002  |   Pubmed ID: 12445121
• The Alpha-amylase Induction in Endosperm During Rice Seed Germination is Caused by Gibberellin Synthesized in Epithelium
  Plant Physiology. Apr, 2002  |   Pubmed ID: 11950975
• The Gibberellin Signaling Pathway is Regulated by the Appearance and Disappearance of SLENDER RICE1 in Nuclei
  The Plant Cell. Jan, 2002  |   Pubmed ID: 11826299
• Rice Dwarf Mutant D1, Which is Defective in the Alpha Subunit of the Heterotrimeric G Protein, Affects Gibberellin Signal Transduction
  Proceedings of the National Academy of Sciences of the United States of America. Oct, 2000  |   Pubmed ID: 11027362
• Loss of Function of a Rice Brassinosteroid Insensitive1 Homolog Prevents Internode Elongation and Bending of the Lamina Joint
  The Plant Cell. Sep, 2000  |   Pubmed ID: 11006334