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Biology
Bestimmung der dreigliedrigen Wechselwirkung zwischen zwei Monomeren eines MADS-Box-Transkription...
Bestimmung der dreigliedrigen Wechselwirkung zwischen zwei Monomeren eines MADS-Box-Transkription...
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JoVE Journal Biology
Determination of Tripartite Interaction between Two Monomers of a MADS-box Transcription Factor and a Calcium Sensor Protein by BiFC-FRET-FLIM Assay

Bestimmung der dreigliedrigen Wechselwirkung zwischen zwei Monomeren eines MADS-Box-Transkriptionsfaktors und eines Calcium-Sensorproteins mittels BiFC-FRET-FLIM-Assay

Full Text
4,260 Views
14:34 min
December 25, 2021

DOI: 10.3791/62791-v

Neelima Boora*1, Vibha Verma*1, Ridhi Khurana1, Gautam Gawande1, Sanchi Bhimrajka1, Komal Chaprana1, Meenu Kapoor2, Sanjay Kapoor1

1Interdisciplinary Centre for Plant Genomics, Department of Plant Molecular Biology,University of Delhi South Campus, 2University School of Biotechnology,Guru Gobind Singh Indraprastha University

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Overview

This study presents a novel method to visualize ternary complex formation between three proteins using bimolecular fluorescence complementation (BiFC) combined with fluorescence resonance energy transfer (FRET) and fluorescence lifetime imaging microscopy (FLIM). The approach allows for the observation of protein-protein interactions within live cells, enhancing our understanding of complex biological processes.

Key Study Components

Research Area

  • Protein-protein interactions
  • Fluorescent imaging technologies
  • Cell biology

Background

  • Understanding protein interactions is crucial for studying various biological functions.
  • This method builds on previous work utilizing BiFC for examining protein complexes.
  • The addition of FLIM provides a more detailed analysis of interactions.

Methods Used

  • BiFC-FRET-FLIM assay for visualizing protein interactions
  • Nicotiana benthamiana as the biological model system
  • Fluorescence lifetime measurements to assess interactions

Main Results

  • Successful demonstration of tripartite interactions between selected proteins.
  • Visualization of reconstituted YFP and its application in FRET analysis.
  • Quantification of interaction through changes in fluorescence lifetime.

Conclusions

  • The study effectively illustrates the use of BiFC-FRET-FLIM for examining complex protein interactions.
  • This method is significant for advancing research in molecular biology and protein signaling pathways.

Frequently Asked Questions

What is the significance of using BiFC with FRET-FLIM?
This combination allows researchers to visualize complex protein interactions and quantify them in vivo, improving our understanding of cell signaling.
Which organism was used in this study?
The study utilized Nicotiana benthamiana, a common model in plant molecular biology.
What are the critical steps in carrying out the method?
Key steps include cloning genes of interest, transforming agrobacteria, and performing agroinfiltration into plant tissues.
How does the method validate the tripartite interactions?
The method validates interactions by measuring the fluorescence lifetime changes of the donor molecule in the presence of acceptors.
What potential applications does this method have?
This method can be applied to study various protein interactions, signaling pathways, and cellular processes in live cells.
How long does it take to prepare plants for the analysis?
Plant preparation takes several weeks, including germination and growth stages before agroinfiltration can occur.
Is this method applicable to organisms other than plants?
While this study focuses on plants, similar techniques can be adapted for use in other model organisms.

Hier stellen wir eine Methode zur Visualisierung der ternären Komplexbildung zwischen drei Proteinpartnern unter Verwendung fluoreszenzmarkierter Proteine durch BiFC-basierten FRET-FLIM-Assay vor. Diese Methode ist wertvoll für die Untersuchung von Protein-Protein-Interaktionskomplexen in vivo.

Die Untersuchung von Protein-Protein-Interaktionen liefert ein Verständnis für die Regulation vieler biologischer Prozesse. Hier demonstrieren wir eine von Y John Schuh und Co. zunächst beschriebene Vorgehensweise. Arbeiter im Jahr 2007, wo die Autoren BiFC in Kombination mit FRET verwendet haben, um die dreigliedrige Interaktion zwischen drei Proteinmolekülen zu validieren.

Wir haben jedoch Fluoreszenzlebensdauermessungen in dieses Verfahren einbezogen, um FRET-Messungen zu untermauern. Um eine dreigliedrige Wechselwirkung zu demonstrieren, haben wir ein Protein gewählt, von dem bekannt ist, dass es homodimerisiert. Darüber hinaus wurde es auch intern validiert, um mit einem Kalziumsensor des Proteins zu interagieren, der in diesem Protokoll als C-Protein bezeichnet wird.

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