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Method Article

Formalin-Fixed Paraffin Embedded (FFPE) Tissue Preservation: A Method for Studying Tissue Morphology

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April 30th, 2023

In This Article

Abstract

Source: Nagaraj A.S., et al., Establishment and Analysis of Tumor Slice Explants As a Prerequisite for Diagnostic Testing. J. Vis. Exp. (2018)

The following video describes how to preserve morphology of a tissue with formalin fixation and paraffin embedding.

Protocol

1. Fixation and Processing of the Tissue Slices

  1. Carefully lift the uncultured 0 h reference or cultured slice onto a filter paper soaked in PBS.
    1. To do this, add 2-3 mL of PBS on top of a filter paper placed in a 10 cm plate. Place the slice on top of the filter paper and lift out the filter paper using a pair of forceps.
    2. Transfer the filter paper into a histocassette, and add a drop of diluted hematoxylin (1:1 in deionized water) on top of the tissue slice to visibly mark the position of the slice during the subsequent processing steps (Figure 1D).
    3. Close the cassette, and transfer it into 4% neutral buffer....

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Results

Lung tumor sectioning for analysis: dissection, vibratome slicing, cultivation, FFPE block generation.
Figure 1: Schematic representation of the workflow for establishment and analysis of murine NSCLC tumor-derived slice explants. (A) Schematic describing the collection and preparation of tumor-bearing lungs for slicing. Lung lobes are.......

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Disclosures

No conflicts of interest declared.

Materials

List of materials used in this article
NameCompanyCatalog NumberComments
10 cm tissue culture plate Sarstedt 83.1802
PBS Lonza BE17-517Q
Formaldehyde Fisher F/1501/PB08
Trifold histo cassette paper Cancer Diagnostics DX26280
Histo cassettes VWR 720-2199
Microtome Thermo Fischer Scientific HM355S
Leica VT1200 S vibrating blade microtomeLeica Biosystems14048142066
Hematoxylin for H&E stainingMerck1.09249.0500
Hematoxylin for counter stainingDakoS3309
EosinSigmaE4382
Hank’s Balanced salt solution (HBSS)SigmaH6648

Tags

Formalin FixationParaffin EmbeddingHisto CassetteNeutral Buffered FormalinAlcohol DehydrationLiquid ParaffinMicrotome SectioningTissue SliceBiomarker Expression