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Journal / Genetics / 植物におけるマイクロRNA転写物を正確かつ効率的に分析するバイオインフォマティクスパイプライン…
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Genetics

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JoVE Journal Genetics
植物におけるマイクロRNA転写物を正確かつ効率的に分析するバイオインフォマティクスパイプライン
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植物におけるマイクロRNA転写物を正確かつ効率的に分析するバイオインフォマティクスパイプライン

Article DOI: 10.3791/59864-v • 06:34 min • January 21st, 2020
January 21st, 2020 •
*1,2, *1,2, 2, 1
1Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Agro-Biotechnology Research Center, Beijing Academy of Agriculture and Forestry Sciences, 2State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Advanced Agricultural Sciences and School of Life Sciences, Peking University
* These authors contributed equally

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バイオインフォマティクスパイプライン、すなわちmiRDeep-P2(略してmiRDP2)は、植物miRNA基準とオーバーホールされたアルゴリズムを備えており、特に複雑で大きなゲノムを持つ種に対して、植物のマイクロRNA転写物を正確かつ効率的に分析することができました。

Tags

遺伝学、問題155、マイクロRNA(miRNA)、植物、sRNA-セク、miRDeep-P2(miRDP2)、次世代シーケンシング、植物miRNA基準、miRDeep-P(miRDP)
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